arc85 / celltalker
Inference of cell-cell communication from single-cell RNAseq data
☆45Updated last year
Related projects: ⓘ
- ☆57Updated 5 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆27Updated last year
- A R package for advanced single cell data viz☆54Updated 10 months ago
- Single cell RNA-seq analysis bundle☆30Updated 5 years ago
- Codes for the scPLC project☆47Updated last year
- Code repository for single cell RNA-seq☆32Updated 3 years ago
- ☆57Updated 4 years ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆31Updated 3 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆33Updated 7 months ago
- Senescent Cell Identification☆25Updated 6 months ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆87Updated 9 months ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆62Updated 2 weeks ago
- ☆56Updated 2 years ago
- Functions for single cell data analysis☆22Updated 3 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆40Updated 7 months ago
- SCDC☆42Updated last year
- A tool for removing doublets from single-cell RNA-seq data☆69Updated 3 years ago
- Visualize the results of cell-cell communication analysis☆19Updated last year
- Mollecular Functional Portraits☆33Updated 5 months ago
- Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…☆36Updated 3 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆44Updated last month
- This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…☆32Updated 10 months ago
- Clone Calling from Visium Spatial Transcriptomics of Cancer samples☆55Updated last year
- Codes used in pan-T cell analysis☆45Updated last year
- mutation(barcode) caller for 10x single cell data☆43Updated 4 years ago
- ☆93Updated 10 months ago
- R Package for Single-Cell Dataset Processing and Visualization☆52Updated 3 years ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆31Updated last year
- Single cell RNA analysis about paper “Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging…☆28Updated 4 years ago
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆36Updated 3 years ago