arc85 / celltalkerLinks
Inference of cell-cell communication from single-cell RNAseq data
☆48Updated 6 months ago
Alternatives and similar repositories for celltalker
Users that are interested in celltalker are comparing it to the libraries listed below
Sorting:
- ☆62Updated 6 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆43Updated last year
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆110Updated 6 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Single cell RNA-seq analysis bundle☆37Updated 6 years ago
- R Package for Single-Cell Dataset Processing and Visualization☆64Updated 4 years ago
- Code repository for single cell RNA-seq☆37Updated 5 years ago
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 4 years ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated last year
- A R package for advanced single cell data viz☆68Updated last month
- Create stacked violin plot☆51Updated 3 years ago
- Methods for decontamination of single cell data☆48Updated 8 months ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- Functions for single cell data analysis☆32Updated 4 years ago
- Draw phylogenetic trees of tumor evolution☆86Updated 2 years ago
- ☆73Updated 2 years ago
- ☆50Updated 5 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆76Updated 2 months ago
- scGSVA: Perform GSVA for single cell RNA seq☆65Updated 11 months ago
- R package for Protein activity analysis of single-cell RNAseq.☆84Updated 2 years ago
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆71Updated 3 years ago
- R package for semi-supervised single-cell data integration☆90Updated 2 months ago
- All software used for “Decoding human fetal liver haematopoiesis” (Popescu, Botting, Stephenson et al., 2019).☆39Updated 5 years ago
- SCDC☆45Updated 4 months ago
- marker-based purification of cell types from single-cell RNA-seq datasets☆129Updated 3 months ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆35Updated 2 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- Enrichment Networks for Pathway Enrichment Analysis☆60Updated 2 years ago
- ☆41Updated 4 years ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆34Updated 4 years ago