A scalable method to infer fate specific gene regulatory network from single cell gene expression data
☆10Jan 21, 2025Updated last year
Alternatives and similar repositories for NetID_package
Users that are interested in NetID_package are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Dec 8, 2023Updated 2 years ago
- Dynamical information enables inference of gene regulation at single-cell scale☆12Jun 9, 2025Updated last year
- Dynamical systems methods for RNA velocity analysis☆24May 19, 2021Updated 5 years ago
- A fast and accurate deconvolution algorithm based on regularized matrix completion algorithm (ENIGMA)☆29Jun 21, 2023Updated 3 years ago
- Difference in Intercellular Communication from scRNA-seq data☆28Oct 14, 2025Updated last year
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆12Feb 11, 2025Updated last year
- Analysis of epigenetic data in Python☆15Updated this week
- Repository for reproducing figures and tables for the study titled, "Mapping spatial organization and genetic cell state regulators to ta…☆10Sep 5, 2024Updated 2 years ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆31Oct 24, 2024Updated 2 years ago
- Code and Data Availability for Single cell transcriptomics reveals a signaling roadmap coordinating endoderm and mesoderm lineage diversi…☆10Apr 16, 2020Updated 6 years ago
- ☆37Oct 4, 2024Updated 2 years ago
- Feature Selection in scRNA-seq☆11Sep 9, 2021Updated 5 years ago
- Landscape Single Cell Entropy☆23Aug 24, 2020Updated 6 years ago
- Code for tidymass2 manuscript☆11Dec 15, 2025Updated 10 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- NeuroVelo: physics-based interpretable learning of cellular dynamics☆10Jan 24, 2026Updated 9 months ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆48Sep 23, 2026Updated last month
- UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference☆30Nov 12, 2024Updated last year
- ☆10Jul 19, 2024Updated 2 years ago
- Independent Component Analysis decipher functional modules for better cell clustering and annotation☆19Apr 4, 2022Updated 4 years ago
- CellDrift: temporal perturbation effects for single cell data☆14Dec 3, 2022Updated 3 years ago
- Probability Model of Accessible Chromatin of Single cells☆11Aug 14, 2026Updated 2 months ago
- R implementation of integration metrics for single-cell data☆14Sep 23, 2026Updated last month
- R package to analyze single cell DNA sequencing data.☆12Oct 14, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆10Oct 7, 2024Updated 2 years ago
- Gain biological insights using LLM.☆14Jan 26, 2026Updated 9 months ago
- A web app to compare single-cell annotations☆10Feb 17, 2025Updated last year
- ☆10Mar 11, 2025Updated last year
- ASCETIC (Agony-baSed Cancer EvoluTion InferenCe) is a novel framework for the inference of a set of statistically significant temporal pa…☆12Apr 18, 2025Updated last year
- Cell type-specific SVG detection☆10Jan 28, 2026Updated 9 months ago
- ☆11Jun 21, 2025Updated last year
- ☆44Jan 12, 2026Updated 9 months ago
- Fast and Scalable Single Cell Differential Expression Analysis using Mixed-effects Models☆15Apr 8, 2026Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Bayesian model for RNA velocity estimation of periodic manifolds☆36Jun 25, 2024Updated 2 years ago
- A pipeline for Smooth-seq data analysis.☆10Sep 23, 2021Updated 5 years ago
- ☆48May 4, 2024Updated 2 years ago
- Dynamic inference from single-cell snapshots by optimal transport☆21Mar 14, 2024Updated 2 years ago
- SCENIC+ analyses☆20Sep 26, 2023Updated 3 years ago
- The scripts used for the analyses in TOME project☆26Nov 28, 2025Updated 11 months ago
- My extensions for Seurat package☆11Jun 26, 2020Updated 6 years ago
Are these results useful?