saezlab / MetaProVizLinks
R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.
β16Updated this week
Alternatives and similar repositories for MetaProViz
Users that are interested in MetaProViz are comparing it to the libraries listed below
Sorting:
- πΆ hlabud: HLA genotype analysis in Rβ17Updated 5 months ago
- Junction centric alternative splicing translatorβ20Updated 2 years ago
- Explore the cancer relevance of your gene listβ52Updated 2 weeks ago
- BioCarta pathway imagesβ11Updated last year
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment oβ¦β14Updated 2 years ago
- R functions underlying OmicsNetβ20Updated 3 weeks ago
- β25Updated 4 months ago
- SCASA: Single cell transcript quantification toolβ21Updated last year
- β16Updated 3 years ago
- Batch Correction and Adaptive Contrast Calling in Complex RNA-seq Experimental Designs Using DESeq2β16Updated this week
- ESTIMATE tumor infiltration, the tidy wayβ16Updated 2 years ago
- The KEGGgraph package to parse KEGG pathways in R into graph objectsβ14Updated 5 months ago
- Trans-association between HLA and TCR-CDR3β18Updated 2 years ago
- xOmicsShiny: an R Shiny application for cross-omics data analysis and pathway mapping, Bioinformatics Advances, Volume 5, Issue 1, 2025, β¦β33Updated 2 months ago
- β13Updated 2 years ago
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analysesβ22Updated 4 years ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.β20Updated 5 months ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Toolsβ37Updated 6 months ago
- β31Updated last year
- Single sample pathway analysis tools for omics dataβ13Updated 11 months ago
- R packageβ22Updated last year
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics dataβ¦β62Updated 3 months ago
- TFregulomeR reveals transcription factorsβ context-specific features and functionsβ16Updated 3 years ago
- Single cell proteomics data processingβ29Updated 3 weeks ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Linksβ16Updated 2 years ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from cβ¦β20Updated 5 months ago
- β16Updated 2 years ago
- PathIntegrate Python package for pathway-based multi-omics data integrationβ16Updated 11 months ago
- β28Updated 2 years ago
- R package that allows easily performing a complete Hi-C data analysis through a Graphical User Interfaceβ16Updated 4 years ago