Alternatives and similar repositories for phip-flow:

Users that are interested in phip-flow are comparing it to the libraries listed below

• athchen / beer
  Bayesian enrichment estimation in R
  ☆10Updated 2 years ago
• matsengrp / phippery
  ☆14Updated 2 months ago
• bbglab / openvariant
  Read, parse and operate different multiple input file formats with OpenVariant
  ☆11Updated last month
• KHP-Informatics / DNAscanv2
  DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring v…
  ☆14Updated 8 months ago
• comprna / R2Dtool
  Analyse RNA feature distributions.
  ☆15Updated last month
• WGLab / AmpBinner
  A barcode demultiplexer for Oxford Nanopore long-read amplicon sequencing data
  ☆10Updated last month
• djhn75 / RNAEditor
  ☆14Updated 2 years ago
• lasersonlab / phip-stat
  Analysis tools for PhIP-seq experiments
  ☆12Updated 2 years ago
• goodarzilab / SwitchFinder
  ☆14Updated 6 months ago
• cpockrandt / PhyloCSFpp
  PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…
  ☆30Updated 2 years ago
• srbehera / DRAGEN_Analysis
  ☆29Updated 7 months ago
• Janga-Lab / Penguin
  Penguin: A Tool for Predicting Pseudouridine Sites in Direct RNA Nanopore Sequencing Data
  ☆13Updated 3 years ago
• julianeweller / MinsePIE
  Modelling insertion efficiency for Prime Insertion Experiments
  ☆13Updated 9 months ago
• pachterlab / qcbc
  ☆19Updated last month
• Xinglab / isoCirc
  isoCirc
  ☆10Updated last year
• ulelab / ultraplex
  Ultra-fast 5' and 3' demultiplexer
  ☆26Updated 8 months ago
• tkzeng / GeneBayes
  ☆22Updated 9 months ago
• torkian / blast-QC
  A Quality Control filter and parser for NCBI BLAST XML results.
  ☆16Updated 4 years ago
• aakechin / cutPrimers
  curPrimers is a tool for trimming primer sequences from amplicon based NGS reads
  ☆17Updated 5 years ago
• nch-igm / snvstory
  Rapid and accurate ancestry inference using SNVs.
  ☆18Updated 9 months ago
• Benson-Genomics-Lab / IRF
  Inverted Repeats Finder: a program to analyze DNA and RNA sequences
  ☆13Updated last year
• JSB-UCLA / Clipper
  A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions
  ☆38Updated 2 years ago
• oicr-gsi / debarcer
  Debarcer: A package for De-Barcoding and Error Correction of sequencing data containing molecular barcodes
  ☆15Updated 3 years ago
• MarioniLab / sarlacc
  The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…
  ☆13Updated 5 years ago
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆26Updated last year
• vicsanga / Postre
  POSTRE: Prediction Of STRuctural variant Effects
  ☆21Updated 4 months ago
• bioforensics / pytaxonkit
  Python bindings for the TaxonKit library
  ☆33Updated 2 weeks ago
• xia-lab / Seq2Fun
  ☆16Updated 9 months ago
• NBISweden / IgDiscover-legacy
  Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads
  ☆17Updated last year
• finkelsteinlab / freebarcodes
  FREE Divergence Error-Correcting DNA Barcodes
  ☆8Updated 6 years ago