ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data
☆20Apr 24, 2024Updated 2 years ago
Alternatives and similar repositories for ScisorWiz
Users that are interested in ScisorWiz are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Iso-Seq reads simulator for PacBio and ONT full-length isoform sequencing technologies☆16Mar 1, 2022Updated 4 years ago
- scisorseqr is an R-package for processing of single-cell long read data and analyzing differential isoform expression across any two cond…☆44Mar 9, 2023Updated 3 years ago
- Isoform co-usage networks from single-cell RNA-seq data☆17Feb 21, 2024Updated 2 years ago
- ☆39Apr 25, 2023Updated 3 years ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Jul 13, 2023Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A Python library to visualize and analyze long-read transcriptomes☆69Jan 19, 2026Updated 3 months ago
- The Isoforms from Single-Cell; Long-read Expression Suite☆39Jan 14, 2025Updated last year
- Code for the BRAIN Initiative Cell Census Network (BICCN) - RF1 Tilgner☆21May 1, 2024Updated 2 years ago
- Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)☆223Updated this week
- Bulk (CP/GZ) and single-cell Iso-Seq in the developing human brain☆16May 30, 2024Updated last year
- ☆15Apr 26, 2023Updated 3 years ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated last month
- ☆11Feb 11, 2021Updated 5 years ago
- Single cell Nanopore sequencing data for Genotype and Phenotype☆58May 15, 2025Updated 11 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Full-length transcriptome splicing and mutation analysis☆90Mar 23, 2026Updated last month
- Single-Cell Omics for Transcriptome CHaracterization (SCOTCH): isoform-level characterization of gene expression through long-read single…☆19Apr 29, 2026Updated last week
- ☆19Mar 8, 2023Updated 3 years ago
- Gencode UTR fix☆17Jan 11, 2023Updated 3 years ago
- Technology agnostic long read analysis pipeline for transcriptomes☆158Jan 25, 2024Updated 2 years ago
- interactive visualization of single-cell transcriptomes☆11Mar 10, 2026Updated last month
- Reference-guided transcript discovery and quantification for long read RNA-Seq data☆238Updated this week
- Dynamical systems methods for RNA velocity analysis☆24May 19, 2021Updated 4 years ago
- Visualizing transcript structure and annotation using ggplot2☆167Aug 24, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆35Nov 8, 2023Updated 2 years ago
- ☆11Apr 25, 2026Updated last week
- R package to detect splicing QTLs (sQTLs)☆13Jul 3, 2023Updated 2 years ago
- Splicing-aware time-course network enricher - exploratory analysis for transcriptomics and/or proteomics time series data☆12Dec 11, 2025Updated 4 months ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆27Mar 3, 2026Updated 2 months ago
- Detect key Units in mosaic Tandem Repeats from representative reads from the same locus☆10Aug 2, 2023Updated 2 years ago
- classify, merge, tracking and annotation of GFF files by comparing to a reference annotation GFF☆272Mar 15, 2026Updated last month
- ☆20Oct 5, 2022Updated 3 years ago
- single-nucleus nanopore reads processing pipeline☆16Aug 16, 2023Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- IsoTools is a python module for Long Read Transcriptome Sequencing (LRTS) analysis.☆27Oct 6, 2023Updated 2 years ago
- Tool for the Quality Control of Long-Read Defined Transcriptomes☆263Updated this week
- ☆14Feb 12, 2026Updated 2 months ago
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated last year
- SCASA: Single cell transcript quantification tool☆23Nov 24, 2023Updated 2 years ago
- Demultiplexing and debarcoding tool designed for LR-Split-seq data.☆25Oct 19, 2023Updated 2 years ago
- Updated scripts and pipelines for processing GESTALT data at single-cell resolution☆20May 22, 2021Updated 4 years ago