cantinilab / scconfluenceLinks
A novel method for single-cell diagonal integration: scConfluence
☆23Updated 5 months ago
Alternatives and similar repositories for scconfluence
Users that are interested in scconfluence are comparing it to the libraries listed below
Sorting:
- ☆26Updated 2 years ago
- Graph-based foundation model for spatial transcriptomics data. Zero-shot spatial domain inference, batch-effect correction, and many othe…☆55Updated this week
- single cell foundation model for Gene network inference and more☆17Updated 3 months ago
- Template repository for creating novel models with scvi-tools☆20Updated 2 years ago
- Accelerated, Python-only, single-cell integration benchmarking metrics☆72Updated this week
- Multi-omic single-cell optimal transport tools☆174Updated this week
- ☆84Updated last year
- ☆64Updated 2 months ago
- GraphCompass: Graph Comparison Tools for Differential Analyses in Spatial Systems☆38Updated 2 months ago
- ☆50Updated 4 months ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments☆94Updated 7 months ago
- End-to-end analysis of spatial multi-omics data☆93Updated 2 months ago
- Unsupervised Deep Disentangled Representation of Single-Cell Omics☆51Updated last week
- Nonnegative spatial factorization for multivariate count data☆59Updated 2 years ago
- Super-resolved spatial transcriptomics by deep data fusion☆74Updated 2 years ago
- Simple scVI implementation☆12Updated this week
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq