Ultrafast GPU-enabled QTL mapper
☆217Jun 29, 2025Updated last year
Alternatives and similar repositories for tensorqtl
Users that are interested in tensorqtl are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Enhanced version of the FastQTL QTL mapper☆72Mar 19, 2023Updated 3 years ago
- Collection of analysis tools for quantitative trait loci☆65Jun 3, 2026Updated last month
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆99Sep 26, 2023Updated 2 years ago
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆27Oct 29, 2019Updated 6 years ago
- ☆23Jun 30, 2026Updated 3 weeks ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A complete tool set for molecular QTL discovery and analysis☆65Apr 16, 2024Updated 2 years ago
- GTEx & TOPMed data production and analysis pipelines☆409Sep 14, 2025Updated 10 months ago
- An R package for multivariate adaptive shrinkage.☆99Nov 7, 2024Updated last year
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆49Dec 16, 2024Updated last year
- PCA for hidden variable inference in QTL mapping: an R package and tutorial☆24Jan 25, 2023Updated 3 years ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆13Apr 3, 2025Updated last year
- Toolkit for QTL mapping and meta-analysis.☆17May 24, 2022Updated 4 years ago
- Repo for the R package coloc☆202Dec 4, 2025Updated 7 months ago
- Code for creating cell-type-specific regulatory element annotation files☆21Jun 11, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆61Mar 24, 2026Updated 4 months ago
- Upgrade to coloc☆14Aug 1, 2018Updated 7 years ago
- Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool☆183Mar 11, 2026Updated 4 months ago
- eqtl analysis pipeline using tensorqtl, saige-qtl, LIMIX, quasar and jaxQTL☆17Feb 3, 2026Updated 5 months ago
- LD Score Regression (LDSC)☆792Jan 16, 2026Updated 6 months ago
- GPU implementation of ARD NMF☆45Jan 20, 2026Updated 6 months ago
- R package for "sum of single effects" regression.☆264Jul 16, 2026Updated last week
- An R package for creating mirrored Manhattan plots☆19Sep 30, 2022Updated 3 years ago
- MetaXcan software and manuscript☆200Jun 7, 2026Updated last month
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Calculates allelic Fold Change (aFC) using standard input files for fastQTL.☆27Jun 30, 2022Updated 4 years ago
- ☆59Updated this week
- Multi-Omic Strategies for TWAS☆13Mar 27, 2023Updated 3 years ago
- regenie is a C++ program for whole genome regression modelling of large genome-wide association studies.☆267Nov 13, 2025Updated 8 months ago
- Integrate DNA-seq and RNA-seq data to identify mutations that are associated with regulatory effects on gene expression.☆141Aug 21, 2024Updated last year
- Assessing enrichment of complex disease or trait associations among QTLs☆16Jun 15, 2020Updated 6 years ago
- locus R package - Large-scale variational inference for variable selection in sparse multiple-response regression☆10Jan 2, 2024Updated 2 years ago
- GWAS gold standards repository☆40Nov 23, 2023Updated 2 years ago
- A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/☆303Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Mediated Expression Score Regression (MESC)☆29Nov 4, 2025Updated 8 months ago
- Robust Allele Specific Quantification and quality controL☆42Dec 13, 2021Updated 4 years ago
- PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a c…☆506Jun 6, 2026Updated last month
- Scripts for implementing the Tractor pipeline☆55Sep 4, 2025Updated 10 months ago
- Mixed models @lme4 + custom covariances + parameter constraints☆54Jan 7, 2021Updated 5 years ago
- software package for integrative genetic association analysis☆37Jul 8, 2023Updated 3 years ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆37Jun 19, 2026Updated last month