Ultrafast GPU-enabled QTL mapper
☆206Jun 29, 2025Updated 8 months ago
Alternatives and similar repositories for tensorqtl
Users that are interested in tensorqtl are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Enhanced version of the FastQTL QTL mapper☆72Mar 19, 2023Updated 3 years ago
- Collection of analysis tools for quantitative trait loci☆62Mar 18, 2026Updated last week
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆27Oct 29, 2019Updated 6 years ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆94Sep 26, 2023Updated 2 years ago
- A complete tool set for molecular QTL discovery and analysis☆63Apr 16, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆20Jul 28, 2025Updated 7 months ago
- GTEx & TOPMed data production and analysis pipelines☆398Sep 14, 2025Updated 6 months ago
- An R package for multivariate adaptive shrinkage.☆94Nov 7, 2024Updated last year
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆47Dec 16, 2024Updated last year
- PCA for hidden variable inference in QTL mapping: an R package and tutorial☆21Jan 25, 2023Updated 3 years ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆12Apr 3, 2025Updated 11 months ago
- Toolkit for QTL mapping and meta-analysis.☆17May 24, 2022Updated 3 years ago
- Repo for the R package coloc☆190Dec 4, 2025Updated 3 months ago
- Code for creating cell-type-specific regulatory element annotation files☆20Jun 11, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆57Updated this week
- Upgrade to coloc☆13Aug 1, 2018Updated 7 years ago
- Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool☆179Mar 11, 2026Updated 2 weeks ago
- GPU implementation of ARD NMF☆45Jan 20, 2026Updated 2 months ago
- R package for "sum of single effects" regression.☆246Updated this week
- LD Score Regression (LDSC)☆770Jan 16, 2026Updated 2 months ago
- ☆41Mar 12, 2026Updated 2 weeks ago
- An R package for creating mirrored Manhattan plots☆18Sep 30, 2022Updated 3 years ago
- MetaXcan software and manuscript☆189Jul 4, 2025Updated 8 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆57Mar 1, 2026Updated 3 weeks ago
- Multi-Omic Strategies for TWAS☆13Mar 27, 2023Updated 2 years ago
- Integrate DNA-seq and RNA-seq data to identify mutations that are associated with regulatory effects on gene expression.☆136Aug 21, 2024Updated last year
- Assessing enrichment of complex disease or trait associations among QTLs☆15Jun 15, 2020Updated 5 years ago
- A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/☆285Updated this week
- GWAS gold standards repository☆40Nov 23, 2023Updated 2 years ago
- regenie is a C++ program for whole genome regression modelling of large genome-wide association studies.☆258Nov 13, 2025Updated 4 months ago
- locus R package - Large-scale variational inference for variable selection in sparse multiple-response regression☆10Jan 2, 2024Updated 2 years ago
- An R package for creating ggplot2 based miami plots.☆18Mar 7, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Robust Allele Specific Quantification and quality controL☆40Dec 13, 2021Updated 4 years ago
- Mediated Expression Score Regression (MESC)☆27Nov 4, 2025Updated 4 months ago
- Mixed models @lme4 + custom covariances + parameter constraints☆53Jan 7, 2021Updated 5 years ago
- Scripts for implementing the Tractor pipeline☆55Sep 4, 2025Updated 6 months ago
- PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a c…☆492Updated this week
- ☆18Oct 4, 2023Updated 2 years ago
- software package for integrative genetic association analysis☆36Jul 8, 2023Updated 2 years ago