boxiangliu / locuscomparerLinks
LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.
☆115Updated 2 years ago
Alternatives and similar repositories for locuscomparer
Users that are interested in locuscomparer are comparing it to the libraries listed below
Sorting:
- Visualization of Colocalization Between eQTL and GWAS Data☆85Updated 3 years ago
- Repo for the R package coloc☆178Updated 2 months ago
- methods for functional summary-based imputation☆88Updated 3 years ago
- High-definition likelihood inference of genetic correlations (HDL)☆123Updated 3 months ago
- R interface to the IEU GWAS database API☆99Updated 2 months ago
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆87Updated last month
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆33Updated 3 months ago
- This is a read-only mirror of the CRAN R package repository. MendelianRandomization — Mendelian Randomization Package☆45Updated last year
- Linking GWAS data to analytical tools in R☆148Updated 3 years ago
- ☆37Updated 4 years ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆19Updated 3 years ago
- Software for estimating correlation of trait effect sizes across populations☆49Updated 4 months ago
- ☆57Updated 8 months ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆55Updated 4 months ago
- Colocalization analysis of genetic association signals☆54Updated 3 months ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆68Updated 11 months ago
- Easily download publicly available GWAS summary statistics.☆76Updated last year
- Hypothesis Prioritisation in multi-trait Colocalization☆54Updated last year
- Make LocusZoom-like plots with your own LD matrix.☆45Updated 3 years ago
- ☆50Updated this week
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆124Updated 10 months ago
- Partners Biobank genomics data QC☆30Updated 5 years ago
- corrplot of LDSC genetic correlation results☆55Updated 3 years ago
- ☆76Updated 3 weeks ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- LDlinkR☆60Updated last year
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆90Updated 2 years ago
- Meta-analysis of genomewide association scans☆61Updated last year
- Contains code to analyze the OneK1K data and perform eQTL mapping of 14 cell types☆35Updated 3 years ago
- Find causal cell-types underlying complex trait genetics☆91Updated 7 months ago