boxiangliu / locuscomparerLinks
LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.
☆116Updated 2 years ago
Alternatives and similar repositories for locuscomparer
Users that are interested in locuscomparer are comparing it to the libraries listed below
Sorting:
- Visualization of Colocalization Between eQTL and GWAS Data☆85Updated 3 years ago
- Repo for the R package coloc☆179Updated 2 months ago
- methods for functional summary-based imputation☆89Updated 3 years ago
- High-definition likelihood inference of genetic correlations (HDL)☆123Updated 4 months ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆34Updated 4 months ago
- R interface to the IEU GWAS database API☆103Updated 2 months ago
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆87Updated 3 weeks ago
- This is a read-only mirror of the CRAN R package repository. MendelianRandomization — Mendelian Randomization Package☆45Updated last year
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆68Updated last year
- Analyses conducting GWAS across the UKBB diverse superpopulations☆58Updated last week
- Linking GWAS data to analytical tools in R☆148Updated 3 years ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆125Updated 10 months ago
- Colocalization analysis of genetic association signals☆53Updated 4 months ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆19Updated 3 years ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- Easily download publicly available GWAS summary statistics.☆76Updated last year
- ☆37Updated 4 years ago
- GWAS Summary Statistics Data Harmonisation☆24Updated last month
- corrplot of LDSC genetic correlation results☆56Updated 3 years ago
- A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.☆72Updated 4 years ago
- Make LocusZoom-like plots with your own LD matrix.☆47Updated 3 years ago
- ☆57Updated 9 months ago
- Software for estimating correlation of trait effect sizes across populations☆50Updated 4 months ago
- ☆77Updated 3 weeks ago
- Hypothesis Prioritisation in multi-trait Colocalization☆55Updated last year
- An elegant package to visualize gene structures☆82Updated 2 years ago
- Contains code to analyze the OneK1K data and perform eQTL mapping of 14 cell types☆35Updated 4 years ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆85Updated 2 years ago
- Find causal cell-types underlying complex trait genetics☆91Updated 8 months ago
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆92Updated 2 years ago