xqwen / integrative
Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization
☆25Updated 5 years ago
Alternatives and similar repositories for integrative:
Users that are interested in integrative are comparing it to the libraries listed below
- software package for integrative genetic association analysis☆34Updated last year
- Colocalization analysis of genetic association signals☆50Updated 2 months ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆31Updated 4 years ago
- Estimate genetic correlation using predicted expression☆21Updated 6 years ago
- Get SNP proxies from the 1000 Genomes Project.☆28Updated 6 years ago
- ☆34Updated 4 years ago
- ☆32Updated last year
- ☆46Updated 3 months ago
- Functional genomics and genome-wide association studies☆65Updated 6 years ago
- haploR: utilities for mining Haploreg and other similar web-based tools☆9Updated 9 months ago
- Fast, integrative fine mapping with functional data☆57Updated 5 years ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆11Updated 2 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- Enhanced version of the FastQTL QTL mapper☆61Updated last year
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆28Updated 7 months ago
- QTL Discovery using Annotations☆24Updated 2 years ago
- ☆20Updated 7 months ago
- Mediated Expression Score Regression (MESC)☆26Updated 2 years ago
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆17Updated 5 months ago
- Robust Allele Specific Quantification and quality controL☆39Updated 3 years ago
- Code supporting analyses in paper on fine-mapping AD loci☆15Updated 3 years ago
- ☆21Updated 3 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- Read PLINK BED/BIM/FAM files into R☆40Updated 3 years ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆23Updated 4 years ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 4 years ago
- Primo☆16Updated 3 years ago
- GWAS genetics Fine-mapping method☆21Updated 3 months ago
- Assessing enrichment of complex disease or trait associations among QTLs☆14Updated 4 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated 7 months ago