heatherjzhou / PCAForQTLLinks
PCA for hidden variable inference in QTL mapping: an R package and tutorial
☆18Updated 2 years ago
Alternatives and similar repositories for PCAForQTL
Users that are interested in PCAForQTL are comparing it to the libraries listed below
Sorting:
- ☆27Updated 3 years ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆24Updated 10 months ago
- The cattle Genotype-Tissue Expression atlas v1☆27Updated 2 years ago
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆31Updated 9 months ago
- Cross-population fine-mapping☆37Updated 9 months ago
- ☆19Updated last year
- Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…☆41Updated last year
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- ☆23Updated last month
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Updated 3 years ago
- GWAS genetics Fine-mapping method☆15Updated last year
- ☆22Updated last month
- A Fine-Mapping pipeline☆21Updated 6 years ago
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆25Updated 9 months ago
- A collection of modules to process and analyze IMGT-HLA sequences.☆28Updated 2 years ago
- ☆23Updated 9 months ago
- ☆37Updated 6 years ago
- GENome Organisation Visual Analytics☆16Updated 3 years ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆41Updated 9 months ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- ☆62Updated 3 years ago
- ☆20Updated 2 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Updated 5 years ago
- ☆10Updated last year
- Single-Cell Omics for Transcriptome CHaracterization (SCOTCH): isoform-level characterization of gene expression through long-read single…☆15Updated this week
- Script used to identify de novo variants from sequencing data.☆12Updated 8 years ago
- Enhanced version of the FastQTL QTL mapper☆68Updated 2 years ago
- Pan-transcriptomic phenotyping☆18Updated this week
- QTL Discovery using Annotations☆25Updated 2 years ago
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆21Updated 6 months ago