heatherjzhou / PCAForQTLLinks
PCA for hidden variable inference in QTL mapping: an R package and tutorial
☆16Updated 2 years ago
Alternatives and similar repositories for PCAForQTL
Users that are interested in PCAForQTL are comparing it to the libraries listed below
Sorting:
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆23Updated 9 months ago
- ☆26Updated 3 years ago
- Cross-population fine-mapping☆38Updated 8 months ago
- Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…☆40Updated last year
- Pan-transcriptomic phenotyping☆18Updated 3 weeks ago
- ☆20Updated 2 years ago
- ☆20Updated 2 years ago
- A tool to plot significant regions of GWAS☆30Updated 2 years ago
- QTL Discovery using Annotations☆25Updated 2 years ago
- ☆23Updated 2 weeks ago
- ☆60Updated 3 years ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆40Updated 7 months ago
- GENome Organisation Visual Analytics☆16Updated 3 years ago
- GTEx analysis scripts☆20Updated 8 years ago
- Enhanced version of the FastQTL QTL mapper☆67Updated 2 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Updated 3 years ago
- ☆30Updated 7 months ago
- A collection of modules to process and analyze IMGT-HLA sequences.☆29Updated 2 years ago
- R package to perform Bayesian Genome-Wide Association Studies☆40Updated last year
- Mediated Expression Score Regression (MESC)☆26Updated 3 years ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆84Updated last year
- The cattle Genotype-Tissue Expression atlas v1☆26Updated 2 years ago
- Script used to identify de novo variants from sequencing data.☆12Updated 8 years ago
- Improving gene isoform quantification with miniQuant☆24Updated last week
- A Fine-Mapping pipeline☆21Updated 5 years ago
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆30Updated 8 months ago
- ☆12Updated 4 years ago
- Single-Cell Omics for Transcriptome CHaracterization (SCOTCH): isoform-level characterization of gene expression through long-read single…☆15Updated this week
- software package for integrative genetic association analysis☆35Updated 2 years ago