anastasia-lucas / hudson
An R package for creating mirrored Manhattan plots
☆18Updated 2 years ago
Alternatives and similar repositories for hudson:
Users that are interested in hudson are comparing it to the libraries listed below
- ☆32Updated last year
- Regional association plots☆25Updated 11 months ago
- Manhattan++☆28Updated last year
- Colocalization analysis of genetic association signals☆51Updated 3 months ago
- Scripts for running a sibling GWAS☆15Updated 2 years ago
- ☆18Updated last year
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆30Updated last year
- An R package for creating ggplot2 based miami plots.☆16Updated last week
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆17Updated 6 months ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆31Updated 4 years ago
- ☆34Updated 4 years ago
- Make LocusZoom-like plots with your own LD matrix.☆39Updated 2 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆40Updated last week
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆22Updated 4 months ago
- ☆21Updated 4 months ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆30Updated last year
- Mediated Expression Score Regression (MESC)☆26Updated 2 years ago
- Sequence kernel association test (SKAT)☆45Updated last month
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆23Updated 5 years ago
- Primo☆16Updated 3 years ago
- Statistical tools for Quantitative Genetic Analyses☆36Updated this week
- A collection of various utilities for GWAS summary statistics☆27Updated 10 months ago
- QTL Discovery using Annotations☆24Updated 2 years ago
- ☆21Updated 2 months ago
- ☆22Updated 3 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 6 years ago
- Scripts to run mQTL analyses as described in the ARIES mQTL paper☆9Updated 9 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆50Updated 5 months ago