Alternatives and similar repositories for hudson

Users that are interested in hudson are comparing it to the libraries listed below

• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆52Updated last month
• variani / finemapr
  Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF
  ☆31Updated last month
• jrs95 / gassocplot2
  Regional association plots
  ☆25Updated last year
• thewonlab / H-MAGMA
  ☆33Updated 2 years ago
• Geeketics / LocusZooms
  Make LocusZoom-like plots with your own LD matrix.
  ☆43Updated 2 years ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆45Updated last year
• clagiamba / moloc
  ☆35Updated 4 years ago
• totajuliusd / topr
  topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…
  ☆66Updated 9 months ago
• atgu / ukbb_pan_ancestry
  Analyses conducting GWAS across the UKBB diverse superpopulations
  ☆51Updated 2 months ago
• joepickrell / gwas-pw
  Pariwise analysis of GWAS
  ☆43Updated 6 years ago
• xqwen / torus
  QTL Discovery using Annotations
  ☆25Updated 2 years ago
• huwenboshi / hess
  Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
  ☆42Updated 7 years ago
• opentargets / genetics-sumstat-harmoniser
  Harmonise GWAS summary statistics against a reference VCF
  ☆41Updated 4 years ago
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆26Updated 3 years ago
• xtonyjiang / GNOVA
  A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.
  ☆30Updated last year
• hakyimlab / gtex-gwas-analysis
  ☆23Updated 3 years ago
• RajLabMSSM / echolocatoR
  Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.
  ☆37Updated 2 years ago
• xinhe-lab / ctwas
  causal TWAS (cTWAS)
  ☆44Updated last week
• cgrace1978 / manhplot
  Manhattan++
  ☆28Updated last year
• bhattacharya-a-bt / isotwas
  ☆23Updated 6 months ago
• Kyoko-wtnb / FUMA_scRNA_data
  Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)
  ☆23Updated 5 years ago
• xihaoli / STAAR
  An R package for performing STAAR procedure in whole-genome sequencing studies
  ☆93Updated 5 months ago
• gusevlab / fusion_twas
  methods for functional summary-based imputation
  ☆85Updated 3 years ago
• hakyimlab / PredictDBPipeline
  ☆15Updated 4 years ago
• StatFunGen / pecotmr
  Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.
  ☆27Updated last week
• precimed / python_convert
  A collection of various utilities for GWAS summary statistics
  ☆28Updated last year
• RHReynolds / LDSCforRyten
  S-LDSC scripts for use on MR server.
  ☆10Updated 3 years ago
• tobyjohnson / gtx
  Genetics ToolboX R package
  ☆32Updated 5 years ago
• RitchieLab / eQTpLot
  Visualization of Colocalization Between eQTL and GWAS Data
  ☆84Updated 3 years ago
• brielin / Popcorn
  Software for estimating correlation of trait effect sizes across populations
  ☆47Updated last month