Alternatives and similar repositories for hudson

Users that are interested in hudson are comparing it to the libraries listed below

• jrs95 / gassocplot2
  Regional association plots
  ☆25Updated last year
• thewonlab / H-MAGMA
  ☆33Updated 2 years ago
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆32Updated 4 years ago
• cgrace1978 / manhplot
  Manhattan++
  ☆28Updated last year
• cuelee / pleio
  ☆19Updated last year
• Kyoko-wtnb / FUMA_scRNA_data
  Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)
  ☆23Updated 5 years ago
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆53Updated last week
• clagiamba / moloc
  ☆35Updated 4 years ago
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆26Updated 3 years ago
• ilarsf / gwasTools
  Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)
  ☆31Updated 3 weeks ago
• bhattacharya-a-bt / isotwas
  ☆22Updated 5 months ago
• juliedwhite / miamiplot
  An R package for creating ggplot2 based miami plots.
  ☆17Updated 3 months ago
• MRCIEU / ariesmqtl
  Scripts to run mQTL analyses as described in the ARIES mQTL paper
  ☆9Updated 9 years ago
• yanglab-emory / TIGAR
  ☆21Updated 2 months ago
• jxzb1988 / MMQTL
  MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…
  ☆11Updated 2 months ago
• hakyimlab / gtex-gwas-analysis
  ☆23Updated 3 years ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆45Updated last year
• xihaoli / MetaSTAAR
  An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
  ☆23Updated 7 months ago
• zhouhufeng / FAVORannotator
  ☆20Updated 2 years ago
• kjgleason / Primo
  Primo
  ☆16Updated 3 years ago
• variani / finemapr
  Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF
  ☆31Updated last week
• RajLabMSSM / echolocatoR
  Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.
  ☆37Updated 2 years ago
• MRCIEU / PhenoSpD
  ☆18Updated 7 years ago
• ZikunY / CARMA
  GWAS genetics Fine-mapping method
  ☆24Updated 8 months ago
• Geeketics / LocusZooms
  Make LocusZoom-like plots with your own LD matrix.
  ☆40Updated 2 years ago
• RitchieLab / GWAS-QC
  Quality control steps for GWAS
  ☆23Updated last year
• jinghuazhao / TWAS-pipeline
  TWAS-pipeline
  ☆22Updated 4 years ago
• Jeremy37 / AD_finemap
  Code supporting analyses in paper on fine-mapping AD loci
  ☆15Updated 3 years ago
• Stahl-Lab-MSSM / coloc2
  Upgrade to coloc
  ☆13Updated 6 years ago
• saralpulit / gwas-scripts
  A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…
  ☆20Updated 7 years ago