PrediXcan Project
☆116Oct 17, 2022Updated 3 years ago
Alternatives and similar repositories for PrediXcan
Users that are interested in PrediXcan are comparing it to the libraries listed below
Sorting:
- MetaXcan software and manuscript☆187Jul 4, 2025Updated 7 months ago
- GPA: Genetic analysis incorporating Pleiotropy and Annotation☆16Feb 27, 2020Updated 6 years ago
- UTMOST (unified test for molecular signatures) is a method for cross-tissue gene expression imputation for transcriptome-wide association…☆44Oct 23, 2025Updated 4 months ago
- LD Score Regression (LDSC)☆763Jan 16, 2026Updated last month
- Create LocusZoom-style plots in R.☆22Mar 5, 2023Updated 2 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆48Aug 30, 2023Updated 2 years ago
- ☆22Jan 15, 2026Updated last month
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Apr 8, 2023Updated 2 years ago
- ☆16Dec 7, 2020Updated 5 years ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 5 years ago
- Code for the in-dev PrediXcan Project☆28Oct 17, 2022Updated 3 years ago
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆27Oct 29, 2019Updated 6 years ago
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Nov 4, 2019Updated 6 years ago
- RSS: Regression with Summary Statistics☆51Sep 16, 2024Updated last year
- Source code of FUMA GWAS web application☆59Nov 17, 2023Updated 2 years ago
- Multi-Omic Strategies for TWAS☆13Mar 27, 2023Updated 2 years ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆201Jul 6, 2023Updated 2 years ago
- Fast, integrative fine mapping with functional data☆61Aug 22, 2019Updated 6 years ago
- Mediated Expression Score Regression (MESC)☆27Nov 4, 2025Updated 3 months ago
- ☆40Jan 24, 2018Updated 8 years ago
- methods for functional summary-based imputation☆96May 24, 2022Updated 3 years ago
- Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release☆382Jun 7, 2023Updated 2 years ago
- Functional genomics and genome-wide association studies☆69Jul 24, 2018Updated 7 years ago
- Ultrafast GPU-enabled QTL mapper☆204Jun 29, 2025Updated 8 months ago
- ☆92Jul 21, 2025Updated 7 months ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆46Dec 16, 2024Updated last year
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆60Oct 31, 2025Updated 4 months ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Feb 27, 2020Updated 6 years ago
- SAME (Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble): Cluster ensemble for single-cell RNA-seq data☆15May 4, 2021Updated 4 years ago
- Code for implementing Mendelian randomization investigations☆20Nov 9, 2015Updated 10 years ago
- Software for estimating correlation of trait effect sizes across populations☆54May 30, 2025Updated 9 months ago
- TWAS-pipeline☆24Feb 21, 2021Updated 5 years ago
- Manhattan++☆28Feb 13, 2024Updated 2 years ago
- ☆38Jan 20, 2021Updated 5 years ago
- ☆57Jan 16, 2025Updated last year
- ☆21Sep 1, 2022Updated 3 years ago
- A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores☆202Aug 21, 2024Updated last year
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 3 years ago
- Format of GWAS summary statistics.☆12Jul 31, 2024Updated last year