douglasyao / mesc

Related projects: ⓘ

• jxzb1988 / MMQTL
  MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…
  ☆10Updated 2 years ago
• xqwen / torus
  QTL Discovery using Annotations
  ☆23Updated last year
• mancusolab / twas_sim
  Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …
  ☆26Updated last year
• hakyimlab / gtex-gwas-analysis
  ☆20Updated 3 years ago
• weizhou0 / qtl
  ☆22Updated 2 months ago
• brielin / Popcorn
  Software for estimating correlation of trait effect sizes across populations
  ☆37Updated last year
• anastasia-lucas / hudson
  An R package for creating mirrored Manhattan plots
  ☆17Updated last year
• xihaoli / MetaSTAAR
  An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
  ☆21Updated last month
• mccoy-lab / MAGE
  Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…
  ☆29Updated 2 months ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆43Updated last year
• yanglab-emory / TIGAR
  ☆20Updated 4 months ago
• immunogenomics / IMPACT
  Code for creating cell-type-specific regulatory element annotation files
  ☆18Updated 3 months ago
• karltayeb / cafeh
  ☆11Updated last year
• thewonlab / H-MAGMA
  ☆32Updated last year
• powellgenomicslab / onek1k_phase1
  Contains code to analyze the OneK1K data and perform eQTL mapping of 14 cell types
  ☆23Updated 2 years ago
• francois-a / fastqtl
  Enhanced version of the FastQTL QTL mapper
  ☆55Updated last year
• clagiamba / moloc
  ☆32Updated 3 years ago
• FINNGEN / finemapping-pipeline
  Statistical fine-mapping pipeline in FinnGen
  ☆24Updated last week
• Kyoko-wtnb / FUMA_scRNA_data
  Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)
  ☆22Updated 4 years ago
• Jeremy37 / AD_finemap
  Code supporting analyses in paper on fine-mapping AD loci
  ☆15Updated 3 years ago
• sb452 / mr-code
  Code for implementing Mendelian randomization investigations
  ☆14Updated 8 years ago
• getian107 / SuSiEx
  Cross-population fine-mapping
  ☆21Updated 4 months ago
• single-cell-genetics / limix_qtl
  ☆18Updated 2 months ago
• natsuhiko / rasqual
  Robust Allele Specific Quantification and quality controL
  ☆37Updated 2 years ago
• huwenboshi / hess
  Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
  ☆39Updated 6 years ago
• bogdanlab / fizi
  Leveraging functional information to improve GWAS summary statistic imputation
  ☆20Updated 3 years ago
• hakyimlab / PredictDBPipeline
  ☆16Updated 3 years ago
• ZikunY / CARMA
  GWAS genetics Fine-mapping method
  ☆15Updated 4 months ago
• xtonyjiang / GNOVA
  A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.
  ☆23Updated 3 months ago
• bhattacharya-a-bt / isotwas
  ☆19Updated 4 months ago