Alternatives and similar repositories for mesc

Users that are interested in mesc are comparing it to the libraries listed below

• single-cell-genetics / limix_qtl
  ☆20Updated 11 months ago
• xqwen / torus
  QTL Discovery using Annotations
  ☆25Updated 2 years ago
• hakyimlab / gtex-gwas-analysis
  ☆22Updated 3 years ago
• xihaoli / MetaSTAAR
  An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
  ☆23Updated 6 months ago
• jxzb1988 / MMQTL
  MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…
  ☆11Updated 2 months ago
• powellgenomicslab / onek1k_phase1
  Contains code to analyze the OneK1K data and perform eQTL mapping of 14 cell types
  ☆30Updated 3 years ago
• Kyoko-wtnb / FUMA_scRNA_data
  Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)
  ☆23Updated 5 years ago
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆53Updated 3 weeks ago
• mancusolab / twas_sim
  Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …
  ☆26Updated last year
• karltayeb / cafeh
  ☆13Updated 2 years ago
• thewonlab / H-MAGMA
  ☆32Updated last year
• xqwen / dap
  software package for integrative genetic association analysis
  ☆34Updated last year
• anastasia-lucas / hudson
  An R package for creating mirrored Manhattan plots
  ☆18Updated 2 years ago
• immunogenomics / IMPACT
  Code for creating cell-type-specific regulatory element annotation files
  ☆18Updated 11 months ago
• clagiamba / moloc
  ☆35Updated 4 years ago
• eQTL-Catalogue / eQTL-Catalogue-resources
  ☆47Updated 2 weeks ago
• yanglab-emory / TIGAR
  ☆21Updated 2 months ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆45Updated last year
• RitchieLab / GWAS-QC
  Quality control steps for GWAS
  ☆22Updated last year
• Jeremy37 / AD_finemap
  Code supporting analyses in paper on fine-mapping AD loci
  ☆15Updated 3 years ago
• cozygene / TCA
  ☆18Updated 4 years ago
• xinhe-lab / ctwas
  causal TWAS (cTWAS)
  ☆43Updated last week
• francois-a / fastqtl
  Enhanced version of the FastQTL QTL mapper
  ☆65Updated 2 years ago
• sb452 / mr-code
  Code for implementing Mendelian randomization investigations
  ☆17Updated 9 years ago
• gkichaev / PAINTOR_V3.0
  Fast, integrative fine mapping with functional data
  ☆58Updated 5 years ago
• PejLab / Pantry
  Pan-transcriptomic phenotyping
  ☆18Updated 3 weeks ago
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆32Updated 4 years ago
• hakyimlab / PredictDBPipeline
  ☆15Updated 4 years ago
• pgxcentre / region-plot
  A tool to plot significant regions of GWAS
  ☆29Updated 2 years ago
• weizhou0 / qtl
  ☆28Updated last month