jianyangqt / oscaLinks
☆20Updated last year
Alternatives and similar repositories for osca
Users that are interested in osca are comparing it to the libraries listed below
Sorting:
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆23Updated 7 months ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆11Updated 2 months ago
- ☆22Updated 5 months ago
- Cross-population fine-mapping☆37Updated 6 months ago
- PCA for hidden variable inference in QTL mapping: an R package and tutorial☆16Updated 2 years ago
- ☆20Updated 2 years ago
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆30Updated 6 months ago
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- ☆26Updated 3 years ago
- Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…☆36Updated 11 months ago
- TWAS-pipeline☆22Updated 4 years ago
- Enhanced version of the FastQTL QTL mapper☆66Updated 2 years ago
- Mediated Expression Score Regression (MESC)☆26Updated 3 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- Quality control steps for GWAS☆23Updated last year
- Colocalization analysis of genetic association signals☆53Updated last week
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆40Updated 6 months ago
- Manhattan++☆28Updated last year
- ☆17Updated 6 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Updated 2 years ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated last year
- Robust Allele Specific Quantification and quality controL☆39Updated 3 years ago
- Fast, integrative fine mapping with functional data☆58Updated 5 years ago
- software package for integrative genetic association analysis☆34Updated last year
- Single Cell Caller (SCcaller) - Identify single nucleotide variations (SNVs) from single cell sequencing data☆34Updated 6 months ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆35Updated 3 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆45Updated 3 months ago
- ☆15Updated 4 years ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆49Updated 2 months ago
- ☆40Updated 7 years ago