weizhou0 / SAIGEQTLLinks
☆29Updated last week
Alternatives and similar repositories for SAIGEQTL
Users that are interested in SAIGEQTL are comparing it to the libraries listed below
Sorting:
- Contains code to analyze the OneK1K data and perform eQTL mapping of 14 cell types☆33Updated 3 years ago
- ☆20Updated last week
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated last year
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆76Updated 3 months ago
- ☆35Updated 4 years ago
- Colocalization analysis of genetic association signals☆52Updated last month
- ☆41Updated last month
- codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data☆19Updated 4 years ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆55Updated 4 years ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- ☆48Updated 2 months ago
- Regional association plots☆25Updated last year
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆23Updated 5 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆42Updated last year
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- InstaPrism is an R package for fast implementation of BayesPrism☆37Updated last year
- Single cell RNA-seq analysis bundle☆35Updated 5 years ago
- ☆50Updated 5 years ago
- Inferring CNV data from single cell ATAC seq☆24Updated last month
- Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of …☆17Updated this week
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- ☆37Updated last year
- R package of colors for the Buenrostro Lab☆84Updated 11 months ago
- scWGCNA☆61Updated 2 years ago
- Robust Allele Specific Quantification and quality controL☆40Updated 3 years ago
- ☆18Updated 4 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- CELLEX (CELL-type EXpression-specificity)☆43Updated 2 years ago
- This repository contains the CellTag data analysis R package to support clone calling and lineage reconstruction.☆21Updated 2 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 3 months ago