broadinstitute / gtex-pipelineLinks
GTEx & TOPMed data production and analysis pipelines
☆377Updated 2 months ago
Alternatives and similar repositories for gtex-pipeline
Users that are interested in gtex-pipeline are comparing it to the libraries listed below
Sorting:
- Intro to ChIPseq using HPC☆310Updated 2 years ago
- Application for making ENCODE Blacklists☆317Updated 4 years ago
- Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms☆395Updated 3 weeks ago
- RNA-seq workflow using STAR and DESeq2☆344Updated last year
- Quick mining and visualization of NGS data by integrating genomic databases☆266Updated 2 years ago
- Customizable workflows based on snakemake and python for the analysis of NGS data☆398Updated 2 weeks ago
- ENCODE ChIP-seq pipeline☆271Updated last year
- ENCODE ATAC-seq pipeline☆427Updated last year
- parallel fastq-dump wrapper☆299Updated 2 years ago
- zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs☆283Updated last year
- Tools for handling Unique Molecular Identifiers in NGS data sets☆517Updated last month
- ATAC-seq peak-calling and QC analysis pipeline☆208Updated last month
- Collections of library structure and sequence of popular single cell genomic methods