Upgrade to coloc
☆14Aug 1, 2018Updated 8 years ago
Alternatives and similar repositories for coloc2
Users that are interested in coloc2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆18Dec 1, 2017Updated 8 years ago
- Assessing enrichment of complex disease or trait associations among QTLs☆16Jun 15, 2020Updated 6 years ago
- Format of GWAS summary statistics.☆12Jul 31, 2024Updated 2 years ago
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆27Oct 29, 2019Updated 6 years ago
- R wrapper for a Java Bayesian GLM variable selection package☆18Feb 7, 2020Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Colocalization analysis of genetic association signals☆60Jun 13, 2025Updated last year
- ☆10Jul 24, 2020Updated 6 years ago
- Get SNP proxies from the 1000 Genomes Project.☆31Oct 4, 2018Updated 7 years ago
- ☆12Oct 14, 2022Updated 3 years ago
- Hypothesis Prioritisation in multi-trait Colocalization☆58Apr 8, 2024Updated 2 years ago
- Clean and identify errors in GWAS summary statistics☆19Jul 21, 2026Updated 3 weeks ago
- software package for integrative genetic association analysis☆37Jul 8, 2023Updated 3 years ago
- Primo☆16Sep 2, 2021Updated 4 years ago
- Convert GWAS sumstat files into a common format with a common reference for positions, rsids and effect alleles.☆24Sep 4, 2025Updated 11 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Fine-mapping method only using summary statistics☆20Mar 23, 2016Updated 10 years ago
- Code and data related to the meta-analysis of fat distribution in UK Biobank and GIANT☆23Dec 5, 2018Updated 7 years ago
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆19Nov 26, 2023Updated 2 years ago
- Code for multivariate genome wide association meta analysis☆25Aug 20, 2019Updated 6 years ago
- Ultrafast GPU-enabled QTL mapper☆217Jun 29, 2025Updated last year
- Materials presented at the BiocNYC meet-up☆12Nov 29, 2018Updated 7 years ago
- Calculates allelic Fold Change (aFC) using standard input files for fastQTL.☆27Jun 30, 2022Updated 4 years ago
- This is a pipeline for calculating weights for TWAS☆35Aug 3, 2022Updated 4 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆15Jul 2, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- R script that performs gene-set or gene property analysis using TWAS results.☆34Apr 10, 2026Updated 4 months ago
- Easily run WDL workflows on GCP☆14Sep 28, 2021Updated 4 years ago
- Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…☆45Apr 28, 2026Updated 3 months ago
- Supplementary Code for "Mapping DNA methylation across development, genotype, and schizophrenia in the human frontal cortex"☆12Oct 27, 2015Updated 10 years ago
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆18Aug 30, 2024Updated last year
- ☆44Nov 28, 2018Updated 7 years ago
- ☆16Jun 1, 2018Updated 8 years ago
- A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores☆209Apr 10, 2026Updated 4 months ago
- A public list of computational methods for cell type inference from genome-scale DNA methylation data☆14Mar 26, 2019Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆47Mar 16, 2026Updated 4 months ago
- ☆12Sep 20, 2019Updated 6 years ago
- This is a ggplot2 geom for plotting and comparing the ROC curves☆10Jul 6, 2016Updated 10 years ago
- lhcMR☆26Mar 24, 2024Updated 2 years ago
- Statistical properties of polygenic risk scores☆19Oct 16, 2019Updated 6 years ago
- Regional association plots☆27Apr 1, 2024Updated 2 years ago
- ☆26Dec 1, 2020Updated 5 years ago