Stahl-Lab-MSSM / coloc2

Related projects ⓘ

Alternatives and complementary repositories for coloc2

• Kyoko-wtnb / FUMA_scRNA_data
  Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)
  ☆22Updated 4 years ago
• MRCIEU / PhenoSpD
  ☆18Updated 6 years ago
• jrs95 / gassocplot2
  Regional association plots
  ☆25Updated 7 months ago
• jrs95 / gassocplot
  Regional association plots
  ☆25Updated 7 months ago
• jrs95 / geni.plots
  GENI plots to visualise results from genome-wide association studies
  ☆21Updated last month
• anastasia-lucas / hudson
  An R package for creating mirrored Manhattan plots
  ☆18Updated 2 years ago
• totajuliusd / topr
  topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…
  ☆49Updated last month
• hakyimlab / gtex-gwas-analysis
  ☆21Updated 3 years ago
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆47Updated this week
• thewonlab / H-MAGMA
  ☆32Updated last year
• sb452 / mr-code
  Code for implementing Mendelian randomization investigations
  ☆15Updated 9 years ago
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆32Updated 4 years ago
• kjgleason / Primo
  Primo
  ☆16Updated 3 years ago
• tobyjohnson / gtx
  Genetics ToolboX R package
  ☆30Updated 4 years ago
• precimed / python_convert
  A collection of various utilities for GWAS summary statistics
  ☆26Updated 6 months ago
• Jeremy37 / AD_finemap
  Code supporting analyses in paper on fine-mapping AD loci
  ☆15Updated 3 years ago
• xqwen / torus
  QTL Discovery using Annotations
  ☆23Updated last year
• clagiamba / moloc
  ☆33Updated 3 years ago
• cgrace1978 / manhplot
  Manhattan++
  ☆26Updated 9 months ago
• hakyimlab / PredictDB_Pipeline_GTEx_v7
  PredictDB Pipeline for GTEx v7 data
  ☆18Updated 2 years ago
• oliviasabik / RACER
  An R package for generating comparative regional association plots
  ☆18Updated this week
• bogdanlab / RHOGE
  Estimate genetic correlation using predicted expression
  ☆19Updated 6 years ago
• hakyimlab / PredictDBPipeline
  ☆16Updated 3 years ago
• cumc / pecotmr
  Pair-wise enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.
  ☆18Updated this week
• mancusolab / sushie
  Software to perform multi-ancestry SNP fine-mapping on molecular data
  ☆15Updated 3 weeks ago
• immunogenomics / IMPACT
  Code for creating cell-type-specific regulatory element annotation files
  ☆18Updated 5 months ago
• RayDebashree / metaUSAT
  metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…
  ☆19Updated 3 years ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆44Updated last year
• jean997 / causeSims
  R package for creating simulated summary statistics and testing MR methods
  ☆12Updated 4 years ago
• single-cell-genetics / limix_qtl
  ☆18Updated 4 months ago