stephenslab / susieRLinks
R package for "sum of single effects" regression.
☆228Updated last month
Alternatives and similar repositories for susieR
Users that are interested in susieR are comparing it to the libraries listed below
Sorting:
- R package for the analysis of massive SNP arrays.☆210Updated 2 months ago
- R-package for structural equation modeling based on GWAS summary data☆250Updated 2 months ago
- Seurat meets tidyverse. The best of both worlds.☆159Updated 3 weeks ago
- An R package for multivariate adaptive shrinkage.☆92Updated 11 months ago
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆174Updated 3 weeks ago
- LASSO for GWAS with summary statistics☆78Updated 5 years ago
- pathfindR: Enrichment Analysis Utilizing Active Subnetworks☆196Updated last month
- R package to estimate q-values and false discovery rate quantities.☆117Updated 2 years ago
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆99Updated 5 months ago
- Polygenic prediction via continuous shrinkage priors☆190Updated 11 months ago
- 🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…☆157Updated 2 months ago
- Linking GWAS data to analytical tools in R☆148Updated 3 years ago
- Pretty heatmaps☆264Updated 4 months ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆67Updated 2 months ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆125Updated 10 months ago
- Contribute Packages to Bioconductor☆144Updated 6 months ago
- R package for quality control of plink genetic datasets☆59Updated last week
- Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology☆94Updated last year
- R data package for annotating/converting Gene IDs☆166Updated 3 months ago
- LDlinkR☆61Updated last year
- Repo for the R package coloc☆179Updated 2 months ago
- Make Interactive Complex Heatmaps☆138Updated last year
- GCTA software☆102Updated 3 months ago
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆92Updated 2 years ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆199Updated 2 years ago
- Decorate a plot with associated information☆122Updated last month
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆165Updated 3 weeks ago
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆87Updated 3 weeks ago
- High-definition likelihood inference of genetic correlations (HDL)☆123Updated 4 months ago
- An R package for creating Q-Q and manhattan plots from GWAS results☆170Updated this week