stephenslab / susieR
R package for "sum of single effects" regression.
☆211Updated 2 months ago
Alternatives and similar repositories for susieR:
Users that are interested in susieR are comparing it to the libraries listed below
- R-package for structural equation modeling based on GWAS summary data☆226Updated 2 months ago
- R package for the analysis of massive SNP arrays.☆206Updated 2 months ago
- An R package for multivariate adaptive shrinkage.☆92Updated 6 months ago
- Repo for the R package coloc☆164Updated last week
- LASSO for GWAS with summary statistics☆74Updated 4 years ago
- ☆194Updated 3 years ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆182Updated last year
- GCTA software☆94Updated last month
- 🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…☆151Updated 6 months ago
- High-definition likelihood inference of genetic correlations (HDL)☆110Updated 3 weeks ago
- Linking GWAS data to analytical tools in R☆135Updated 2 years ago
- Polygenic prediction via continuous shrinkage priors☆172Updated 5 months ago
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆96Updated last year
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆171Updated last month
- Seurat meets tidyverse. The best of both worlds.☆160Updated 9 months ago
- An R package for performing STAAR procedure in whole-genome sequencing studies☆94Updated 2 months ago
- pathfindR: Enrichment Analysis Utilizing Active Subnetworks☆189Updated 2 months ago
- A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores☆197Updated 8 months ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆110Updated 4 months ago
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆80Updated 3 weeks ago
- Codebook from my GWAS cookbook☆190Updated 2 years ago
- LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.☆113Updated 2 years ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆146Updated 11 months ago
- R package for quality control of plink genetic datasets☆58Updated 4 months ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆59Updated 6 months ago
- R package to estimate q-values and false discovery rate quantities.☆116Updated last year
- Statistical tools for Quantitative Genetic Analyses☆36Updated last week
- Visualization of Colocalization Between eQTL and GWAS Data☆83Updated 2 years ago
- make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.☆190Updated last year
- An R package for creating Q-Q and manhattan plots from GWAS results☆166Updated last year