Alternatives and similar repositories for fastenloc

Users that are interested in fastenloc are comparing it to the libraries listed below

• clagiamba / moloc
  ☆36Updated 4 years ago
• variani / finemapr
  Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF
  ☆32Updated last month
• thewonlab / H-MAGMA
  ☆34Updated 2 years ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆46Updated last year
• brielin / Popcorn
  Software for estimating correlation of trait effect sizes across populations
  ☆47Updated 2 months ago
• jrs95 / gassocplot2
  Regional association plots
  ☆25Updated last year
• RajLabMSSM / echolocatoR
  Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.
  ☆38Updated 2 years ago
• huwenboshi / hess
  Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
  ☆41Updated 7 years ago
• xqwen / torus
  QTL Discovery using Annotations
  ☆25Updated 2 years ago
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆26Updated 3 years ago
• anastasia-lucas / hudson
  An R package for creating mirrored Manhattan plots
  ☆18Updated 2 years ago
• totajuliusd / topr
  topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…
  ☆67Updated 9 months ago
• xtonyjiang / GNOVA
  A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.
  ☆30Updated last year
• gkichaev / PAINTOR_V3.0
  Fast, integrative fine mapping with functional data
  ☆60Updated 5 years ago
• StatFunGen / pecotmr
  Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.
  ☆27Updated 2 weeks ago
• wuyangf7 / OPERA
  This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…
  ☆36Updated 10 months ago
• cgrace1978 / manhplot
  Manhattan++
  ☆28Updated last year
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆33Updated 4 years ago
• eQTL-Catalogue / eQTL-Catalogue-resources
  ☆48Updated 2 months ago
• fhormoz / caviar
  ☆61Updated 3 years ago
• RitchieLab / eQTpLot
  Visualization of Colocalization Between eQTL and GWAS Data
  ☆84Updated 3 years ago
• francois-a / fastqtl
  Enhanced version of the FastQTL QTL mapper
  ☆67Updated 2 years ago
• opentargets / genetics-sumstat-harmoniser
  Harmonise GWAS summary statistics against a reference VCF
  ☆41Updated 4 years ago
• precimed / python_convert
  A collection of various utilities for GWAS summary statistics
  ☆29Updated last year
• andreyshabalin / MatrixEQTL
  Matrix eQTL: Ultra fast eQTL analysis via large matrix operations
  ☆84Updated last year
• RHReynolds / LDSCforRyten
  S-LDSC scripts for use on MR server.
  ☆10Updated 3 years ago
• atgu / ukbb_pan_ancestry
  Analyses conducting GWAS across the UKBB diverse superpopulations
  ☆52Updated 2 months ago
• Geeketics / LocusZooms
  Make LocusZoom-like plots with your own LD matrix.
  ☆44Updated 3 years ago
• hakyimlab / gtex-gwas-analysis
  ☆23Updated 4 years ago
• tobyjohnson / gtx
  Genetics ToolboX R package
  ☆32Updated 5 years ago