Repo for the R package coloc
☆191Dec 4, 2025Updated 3 months ago
Alternatives and similar repositories for coloc
Users that are interested in coloc are comparing it to the libraries listed below
Sorting:
- Hypothesis Prioritisation in multi-trait Colocalization☆55Apr 8, 2024Updated last year
- LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.☆119Nov 24, 2022Updated 3 years ago
- Pair-wise conditional analysis and colocalisation☆42May 2, 2024Updated last year
- Regional association plots☆26Apr 1, 2024Updated last year
- LD Score Regression (LDSC)☆763Jan 16, 2026Updated last month
- Colocalization analysis of genetic association signals☆55Jun 13, 2025Updated 8 months ago
- R interface to the IEU GWAS database API☆106Dec 15, 2025Updated 2 months ago
- ☆38Jan 20, 2021Updated 5 years ago
- R package for "sum of single effects" regression.☆245Updated this week
- Reading, querying and writing GWAS summary data in VCF format☆96Nov 21, 2025Updated 3 months ago
- High-definition likelihood inference of genetic correlations (HDL)☆128Dec 15, 2025Updated 2 months ago
- R package for two-sample Mendelian randomization using the robust adjusted profile score☆40Oct 31, 2025Updated 4 months ago
- Linking GWAS data to analytical tools in R☆155May 20, 2022Updated 3 years ago
- methods for functional summary-based imputation☆96May 24, 2022Updated 3 years ago
- R package to perform two-sample Mendelian Randomisation (MR) analyses using (potentially) overlapping samples☆68Jan 9, 2025Updated last year
- LDlinkR☆63Apr 17, 2024Updated last year
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆129Dec 9, 2024Updated last year
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆39Sep 18, 2025Updated 5 months ago
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆100May 27, 2025Updated 9 months ago
- A collection of various utilities for GWAS summary statistics☆32May 14, 2024Updated last year
- Genetics ToolboX R package☆32Feb 10, 2020Updated 6 years ago
- ☆56Updated this week
- LD Score Regression in R☆52Aug 19, 2025Updated 6 months ago
- Software implementing the Latent Causal Variable Model☆64Jun 30, 2020Updated 5 years ago
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆27Oct 29, 2019Updated 6 years ago
- A tool to build a website to browse hundreds or thousands of GWAS.☆192Sep 11, 2025Updated 5 months ago
- ☆92Jul 21, 2025Updated 7 months ago
- R package for performing 2-sample MR using IEU OpenGWAS database☆532Feb 26, 2026Updated last week
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆94Jul 25, 2023Updated 2 years ago
- A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/☆280Feb 17, 2026Updated 2 weeks ago
- R package that contains plink binaries for windows, mac and linux☆14Oct 14, 2019Updated 6 years ago
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆94Jan 6, 2026Updated 2 months ago
- ☆57Jan 16, 2025Updated last year
- Colocalisation pipeline for Open Targets Genetics☆17Apr 8, 2022Updated 3 years ago
- GPA: Genetic analysis incorporating Pleiotropy and Annotation☆16Feb 27, 2020Updated 6 years ago
- FLAMES: Accurate gene prioritization in GWAS loci☆57Dec 16, 2025Updated 2 months ago
- MetaXcan software and manuscript☆188Jul 4, 2025Updated 8 months ago
- ☆64Dec 30, 2021Updated 4 years ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆46Dec 16, 2024Updated last year