Repo for the R package coloc
☆199Dec 4, 2025Updated 6 months ago
Alternatives and similar repositories for coloc
Users that are interested in coloc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Hypothesis Prioritisation in multi-trait Colocalization☆57Apr 8, 2024Updated 2 years ago
- LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.☆134Nov 24, 2022Updated 3 years ago
- Pair-wise conditional analysis and colocalisation☆41May 2, 2024Updated 2 years ago
- R interface to the IEU GWAS database API☆109Updated this week
- LD Score Regression (LDSC)☆787Jan 16, 2026Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆39Jan 20, 2021Updated 5 years ago
- R package for two-sample Mendelian randomization using the robust adjusted profile score☆42Oct 31, 2025Updated 7 months ago
- Colocalization analysis of genetic association signals☆59Jun 13, 2025Updated last year
- R package for "sum of single effects" regression.☆260Updated this week
- Regional association plots☆27Apr 1, 2024Updated 2 years ago
- methods for functional summary-based imputation☆104Mar 17, 2026Updated 2 months ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆42Sep 18, 2025Updated 8 months ago
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆27Oct 29, 2019Updated 6 years ago
- High-definition likelihood inference of genetic correlations (HDL)☆139May 8, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- R package to perform two-sample Mendelian Randomisation (MR) analyses using (potentially) overlapping samples☆68Jan 9, 2025Updated last year
- R package for performing 2-sample MR using IEU OpenGWAS database☆548Updated this week
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆102May 27, 2025Updated last year
- ☆58Apr 26, 2026Updated last month
- LDlinkR☆64Apr 17, 2024Updated 2 years ago
- A collection of various utilities for GWAS summary statistics☆34May 14, 2024Updated 2 years ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆133Dec 9, 2024Updated last year
- Reading, querying and writing GWAS summary data in VCF format☆107Mar 16, 2026Updated 3 months ago
- Linking GWAS data to analytical tools in R☆158May 20, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- LD Score Regression in R☆53Aug 19, 2025Updated 9 months ago
- GPA: Genetic analysis incorporating Pleiotropy and Annotation☆16Feb 27, 2020Updated 6 years ago
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆95Jul 25, 2023Updated 2 years ago
- Software implementing the Latent Causal Variable Model☆65Jun 30, 2020Updated 5 years ago
- Genetics ToolboX R package☆32Feb 10, 2020Updated 6 years ago
- ☆97Jul 21, 2025Updated 10 months ago
- ☆68Dec 30, 2021Updated 4 years ago
- A tool to build a website to browse hundreds or thousands of GWAS.☆198Apr 22, 2026Updated last month
- Colocalisation pipeline for Open Targets Genetics☆18May 11, 2026Updated last month
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- R package that contains plink binaries for windows, mac and linux☆16Oct 14, 2019Updated 6 years ago
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆95Apr 16, 2026Updated last month
- Regional association plots☆25Apr 1, 2024Updated 2 years ago
- An R package for fitting and visualising radial inverse variance weighted and radial MR-Egger models.☆34May 14, 2026Updated last month
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆210Jul 6, 2023Updated 2 years ago
- Visualization of Colocalization Between eQTL and GWAS Data☆89May 13, 2022Updated 4 years ago
- Create Regional Association Plots☆13May 27, 2026Updated 2 weeks ago