Enhanced version of the FastQTL QTL mapper
☆73Mar 19, 2023Updated 3 years ago
Alternatives and similar repositories for fastqtl
Users that are interested in fastqtl are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Ultrafast GPU-enabled QTL mapper☆218Jun 29, 2025Updated last year
- A complete tool set for molecular QTL discovery and analysis☆65Apr 16, 2024Updated 2 years ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆102Sep 26, 2023Updated 3 years ago
- An R package for creating mirrored Manhattan plots☆19Sep 30, 2022Updated 3 years ago
- Calculates allelic Fold Change (aFC) using standard input files for fastQTL.☆28Jun 30, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆50Dec 16, 2024Updated last year
- GTEx & TOPMed data production and analysis pipelines☆412Sep 14, 2025Updated last year
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆27Oct 29, 2019Updated 6 years ago
- ☆14Jun 15, 2022Updated 4 years ago
- Create regional association plots from GWAS or meta-analysis☆64Jan 21, 2020Updated 6 years ago
- Committee Meeting Reports - LaTeX☆11Jun 11, 2018Updated 8 years ago
- Collection of analysis tools for quantitative trait loci☆66Sep 20, 2026Updated last week
- ☆61Updated this week
- PCA for hidden variable inference in QTL mapping: an R package and tutorial☆24Jan 25, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆25Apr 25, 2023Updated 3 years ago
- R package for "sum of single effects" regression.☆268Sep 18, 2026Updated last week
- Colocalization analysis of genetic association signals☆62Jun 13, 2025Updated last year
- LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.☆136Jul 8, 2026Updated 2 months ago
- Regional association plots☆25Apr 1, 2024Updated 2 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆22Jul 9, 2026Updated 2 months ago
- A factor analysis package☆110May 8, 2012Updated 14 years ago
- Repo for the R package coloc☆209Updated this week
- ☆28Sep 24, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Toolkit for QTL mapping and meta-analysis.☆17May 24, 2022Updated 4 years ago
- Causal Variant Evidence Mapping with Non-parametric resampling☆12Dec 16, 2020Updated 5 years ago
- An R package for multivariate adaptive shrinkage.☆101Nov 7, 2024Updated last year
- Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool☆184Mar 11, 2026Updated 6 months ago
- GWAS gold standards repository☆40Nov 23, 2023Updated 2 years ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆64Updated this week
- ☆12Apr 18, 2022Updated 4 years ago
- LD Score Regression (LDSC)☆799Jan 16, 2026Updated 8 months ago
- Robust Allele Specific Quantification and quality controL☆42Dec 13, 2021Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- LDlinkR☆66Jun 22, 2026Updated 3 months ago
- ☆23Sep 23, 2022Updated 4 years ago
- ☆14Jul 27, 2019Updated 7 years ago
- eQTLHap: a comprehensive eQTL analysis tool.☆11Apr 15, 2021Updated 5 years ago
- Scripts for running a sibling GWAS☆16Mar 16, 2022Updated 4 years ago
- Fast inference for Generalised Linear Mixed Models.☆14Jan 17, 2025Updated last year
- Multi-Omic Strategies for TWAS☆13Mar 27, 2023Updated 3 years ago