francois-a / fastqtlLinks
Enhanced version of the FastQTL QTL mapper
☆70Updated 2 years ago
Alternatives and similar repositories for fastqtl
Users that are interested in fastqtl are comparing it to the libraries listed below
Sorting:
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆56Updated last month
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆85Updated 2 years ago
- Tutorial Website☆60Updated 4 years ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆11Updated 7 months ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆74Updated last week
- DCC/DAC methylation pipeline source☆57Updated 5 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- ☆63Updated 3 years ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated 2 weeks ago
- A complete tool set for molecular QTL discovery and analysis☆58Updated last year
- A modular, containerized pipeline for ATAC-seq data processing☆60Updated last month
- A toolkit for QC and visualization of ATAC-seq results.☆72Updated 10 months ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆54Updated last year
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆43Updated 11 months ago
- Detection of differential translated genes using Ribo-seq☆16Updated 4 years ago
- ☆27Updated 5 years ago
- HMMRATAC peak caller for ATAC-seq data☆99Updated last year
- A toolset for profiling alternative splicing events in RNA-Seq data.☆82Updated 9 months ago
- tools to find circRNAs in RNA-seq data☆44Updated 8 years ago
- ☆32Updated 7 years ago
- ☆72Updated 2 years ago
- Scripts to import your FeatureCounts output into DEXSeq☆34Updated 7 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆67Updated 6 years ago
- A factor analysis package☆102Updated 13 years ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆60Updated 5 years ago
- RNA editing tests☆17Updated 5 years ago
- snakemake workflow for post-processing scATACseq data☆22Updated 5 years ago
- Genomic Association Tester☆33Updated 2 years ago
- Pipeline for Cut&Tag analysis☆24Updated 7 months ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago