francois-a / fastqtlLinks
Enhanced version of the FastQTL QTL mapper
☆68Updated 2 years ago
Alternatives and similar repositories for fastqtl
Users that are interested in fastqtl are comparing it to the libraries listed below
Sorting:
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆51Updated this week
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆85Updated last year
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆54Updated last year
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated this week
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆40Updated 3 years ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆11Updated 5 months ago
- ☆62Updated 3 years ago
- A toolkit for QC and visualization of ATAC-seq results.☆71Updated 8 months ago
- A complete tool set for molecular QTL discovery and analysis☆57Updated last year
- tools to find circRNAs in RNA-seq data☆44Updated 7 years ago
- HMMRATAC peak caller for ATAC-seq data☆99Updated 10 months ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆41Updated 9 months ago
- ☆38Updated 4 years ago
- ☆72Updated 2 years ago
- Tutorial Website☆59Updated 4 years ago
- DCC/DAC methylation pipeline source☆56Updated 5 years ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆73Updated 2 months ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆82Updated 7 months ago
- A modular, containerized pipeline for ATAC-seq data processing☆59Updated 3 months ago
- Genomic Association Tester☆32Updated 2 years ago
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆66Updated 5 months ago
- Sequence kernel association test (SKAT)☆52Updated last month
- Fast, integrative fine mapping with functional data☆60Updated 6 years ago
- ☆26Updated 4 years ago
- ☆13Updated 8 years ago
- An R package to time somatic mutations☆62Updated 4 years ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆60Updated 5 years ago
- RNA editing tests☆17Updated 4 years ago
- methods for functional summary-based imputation☆88Updated 3 years ago
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆27Updated 6 years ago