francois-a / fastqtlLinks
Enhanced version of the FastQTL QTL mapper
☆66Updated 2 years ago
Alternatives and similar repositories for fastqtl
Users that are interested in fastqtl are comparing it to the libraries listed below
Sorting:
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆49Updated 2 months ago
- ATAC-seq processing pipeline☆33Updated 3 years ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆11Updated 2 months ago
- ☆26Updated 4 years ago
- Robust Allele Specific Quantification and quality controL☆39Updated 3 years ago
- Quality control steps for GWAS☆23Updated last year
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆80Updated last year
- Colocalization analysis of genetic association signals☆53Updated last week
- Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…☆36Updated 11 months ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆54Updated last year
- A complete tool set for molecular QTL discovery and analysis☆55Updated last year
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆64Updated 3 months ago
- ☆48Updated last month
- Contains code to analyze the OneK1K data and perform eQTL mapping of 14 cell types☆30Updated 3 years ago
- Functional genomics and genome-wide association studies☆67Updated 6 years ago
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆30Updated 6 months ago
- methods for functional summary-based imputation☆85Updated 3 years ago
- Tutorial Website☆59Updated 4 years ago
- Burden testing against public controls☆50Updated last year
- Sequence kernel association test (SKAT)☆50Updated 4 months ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆53Updated 3 weeks ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆45Updated this week
- Fast, integrative fine mapping with functional data☆58Updated 5 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆31Updated last week
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated last year
- A factor analysis package☆100Updated 13 years ago
- DCC/DAC methylation pipeline source☆55Updated 4 years ago
- Detection of differential translated genes using Ribo-seq☆16Updated 4 years ago
- ☆35Updated 4 years ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆40Updated 6 months ago