broadinstitute / gtex-v8Links
Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper
☆41Updated 9 months ago
Alternatives and similar repositories for gtex-v8
Users that are interested in gtex-v8 are comparing it to the libraries listed below
Sorting:
- Enhanced version of the FastQTL QTL mapper☆68Updated 2 years ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆85Updated 2 years ago
- ☆63Updated 3 years ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated this week
- Fast, integrative fine mapping with functional data☆60Updated 6 years ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆54Updated last year
- processes GoT amplicon data and generates a table of metrics☆32Updated 3 years ago
- An accurate and efficient HLA imputation method.☆26Updated 2 years ago
- An R package to time somatic mutations☆64Updated 4 years ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆53Updated last week
- ☆26Updated 5 years ago
- Fuji plot—a circos representation of multiple GWAS results—☆91Updated 4 months ago
- Cross-population fine-mapping☆37Updated 9 months ago
- causal TWAS (cTWAS)☆46Updated last week
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆40Updated 3 years ago
- ☆23Updated 7 months ago
- ☆21Updated 2 years ago
- RNA editing tests☆17Updated 5 years ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆90Updated 6 months ago
- ☆48Updated 4 months ago
- ATAC-seq processing pipeline☆34Updated 3 years ago
- software package for integrative genetic association analysis☆35Updated 2 years ago
- A thorough tutorial on HLA imputation and association, accompanying our manuscript "Tutorial: A statistical genetics guide to identifying…☆70Updated 11 months ago
- Tutorial Website☆59Updated 4 years ago
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆67Updated 6 months ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 7 years ago
- Quality control steps for GWAS☆24Updated 2 years ago
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆71Updated last year
- A tool to plot significant regions of GWAS☆29Updated 2 years ago