broadinstitute / gtex-v8Links
Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper
☆40Updated 7 months ago
Alternatives and similar repositories for gtex-v8
Users that are interested in gtex-v8 are comparing it to the libraries listed below
Sorting:
- Enhanced version of the FastQTL QTL mapper☆67Updated 2 years ago
- ☆60Updated 3 years ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆49Updated 3 weeks ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆54Updated last year
- Fast, integrative fine mapping with functional data☆59Updated 5 years ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated 3 weeks ago
- A tool to plot significant regions of GWAS☆30Updated 2 years ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆81Updated last year
- An accurate and efficient HLA imputation method.☆25Updated 2 years ago
- processes GoT amplicon data and generates a table of metrics☆30Updated 3 years ago
- An R package to time somatic mutations☆62Updated 4 years ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- Cross-population fine-mapping☆37Updated 7 months ago
- ☆23Updated 6 months ago
- Colocalization analysis of genetic association signals☆52Updated last month
- Quality control steps for GWAS☆23Updated last year
- ATAC-seq processing pipeline☆33Updated 3 years ago
- Functional genomics and genome-wide association studies☆67Updated 6 years ago
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆65Updated 3 months ago
- Make LocusZoom-like plots with your own LD matrix.☆43Updated 2 years ago
- Manhattan++☆28Updated last year
- ☆20Updated 2 years ago
- ☆48Updated last month
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- QTL Discovery using Annotations☆25Updated 2 years ago
- ☆26Updated 4 years ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆23Updated 8 months ago
- ☆15Updated 4 years ago
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆71Updated last year
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 6 years ago