eQTL-Catalogue / qtlmapLinks
Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue
☆56Updated 2 months ago
Alternatives and similar repositories for qtlmap
Users that are interested in qtlmap are comparing it to the libraries listed below
Sorting:
- Enhanced version of the FastQTL QTL mapper☆71Updated 2 years ago
- HMMRATAC peak caller for ATAC-seq data☆99Updated last year
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- Tutorial Website☆60Updated 4 years ago
- ☆72Updated 2 years ago
- A toolkit for QC and visualization of ATAC-seq results.☆72Updated 11 months ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆87Updated 2 years ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆54Updated last year
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆60Updated 5 years ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆82Updated 4 years ago
- RNA editing tests☆17Updated 5 years ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆74Updated last month
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆68Updated 8 months ago
- A quickstart tool for AmpliconArchitect. Enables all steps (alignment, CNV calling, seed interval detection) prior to running AmpliconArc…☆75Updated last week
- REDItools are python scripts to investigate RNA editing at genomic scale.☆69Updated 4 months ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- A tool for the calculation of RNA-editing index for RNA seq data☆45Updated last month
- A modular, containerized pipeline for ATAC-seq data processing