Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue
☆64Sep 26, 2026Updated last month
Alternatives and similar repositories for qtlmap
Users that are interested in qtlmap are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆13Apr 3, 2025Updated last year
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 6 years ago
- Enhanced version of the FastQTL QTL mapper☆73Mar 19, 2023Updated 3 years ago
- Ultrafast GPU-enabled QTL mapper☆221Jun 29, 2025Updated last year
- Collection of analysis tools for quantitative trait loci☆66Sep 20, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Statistical fine-mapping pipeline in FinnGen☆35Aug 14, 2026Updated 2 months ago
- Visualization of Colocalization Between eQTL and GWAS Data☆91May 13, 2022Updated 4 years ago
- A framework to score and analyze variant effects genome-wide using ChromBPNet models☆22Mar 2, 2026Updated 8 months ago
- eqtl analysis pipeline using tensorqtl, saige-qtl, LIMIX, quasar and jaxQTL☆18Feb 3, 2026Updated 9 months ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆57Oct 28, 2026Updated last week
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆103Sep 26, 2023Updated 3 years ago
- A complete tool set for molecular QTL discovery and analysis☆65Apr 16, 2024Updated 2 years ago
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆16Apr 28, 2025Updated last year
- ☆50Aug 17, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Make interactive LocusZoom plots from a local GWAS file☆10May 9, 2025Updated last year
- ☆20Oct 4, 2023Updated 3 years ago
- ☆23Jun 30, 2026Updated 4 months ago
- ☆24Sep 11, 2026Updated last month
- In-house computational biology workflows at Columbia Neurology☆36Sep 7, 2025Updated last year
- A collection of modules to process and analyze IMGT-HLA sequences.☆29Dec 18, 2022Updated 3 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆23Jun 28, 2024Updated 2 years ago
- GTEx & TOPMed data production and analysis pipelines☆414Sep 14, 2025Updated last year
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆36Jun 17, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated 9 months ago
- Open Targets python framework for post-GWAS analysis☆61Updated this week
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 7 years ago
- ☆25Jul 29, 2025Updated last year
- Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression☆16Jun 28, 2024Updated 2 years ago
- Toolkit for QTL mapping and meta-analysis.☆18May 24, 2022Updated 4 years ago
- Colocalisation pipeline for Open Targets Genetics☆18May 11, 2026Updated 5 months ago
- ☆15Dec 7, 2020Updated 5 years ago
- Fine-mapping pipeline for Open Targets Genetics☆29May 11, 2026Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Structural variant VCF annotation, filtering, duplicate removal and comparison☆37Sep 3, 2026Updated 2 months ago
- R package for "sum of single effects" regression.☆272Oct 25, 2026Updated last week
- Repo for the R package coloc☆214Updated this week
- Code accompanying "Impact of admixture and ancestry on eQTL analysis and GWAS colocalization in GTEx"☆11Oct 17, 2022Updated 4 years ago
- Interactive eQTL visualizations☆15Dec 12, 2022Updated 3 years ago
- QTL Discovery using Annotations☆29Dec 12, 2022Updated 3 years ago
- Code supporting analyses in paper on fine-mapping AD loci☆17Jun 28, 2021Updated 5 years ago