brian-cleary / CS-SMAFLinks
☆18Updated 8 years ago
Alternatives and similar repositories for CS-SMAF
Users that are interested in CS-SMAF are comparing it to the libraries listed below
Sorting:
- Dynamic models for single-cell RNA-seq time series.☆40Updated 7 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year
- Single-cell Scalable Visualization and Analytics☆26Updated 6 years ago
- Fast motif matching in R☆46Updated last year
- ☆29Updated 2 years ago
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago
- ☆37Updated 7 months ago
- Scripts to run and benchmark scRNA-seq cell cluster labeling methods☆48Updated 5 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 5 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆39Updated 3 years ago
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆23Updated 6 years ago
- ☆28Updated 6 years ago
- post-clustering differential expression test☆36Updated 6 years ago
- Scalable Tool for Gene Network Reverse Engineering☆24Updated last year
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 3 years ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆45Updated 9 years ago
- Algorithms for single-cell analysis☆29Updated 4 years ago
- Code for reproducing results from the paper "Modular and efficient pre-processing of single-cell RNA-seq data"☆23Updated 4 years ago
- Single cell interactive plotting tools☆23Updated 5 years ago
- Population balance analysis☆44Updated 6 years ago
- ☆43Updated 4 years ago
- Predicted cell-cell interactions of the aging mouse brain☆20Updated 6 years ago
- Experimental design framework for scRNAseq population studies (eQTL and DE)☆46Updated 9 months ago
- supporting code for the multinomial single cell RNA-Seq paper☆52Updated 4 years ago
- Marker gene selection from scRNA-seq data☆15Updated 5 years ago
- Analysis pipeline for the adolescent mouse nervous system project☆24Updated 7 years ago
- Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment☆18Updated 4 years ago
- ☆12Updated last year
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- ☆15Updated 4 years ago