anders-biostat / sleepwalkLinks
Exploring dimension-reduced embeddings
☆110Updated 3 years ago
Alternatives and similar repositories for sleepwalk
Users that are interested in sleepwalk are comparing it to the libraries listed below
Sorting:
- ☆74Updated last year
- ☆95Updated last year
- Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets☆105Updated last year
- Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave☆44Updated last year
- Topics In Data Science and Bioinformatics☆78Updated last year
- Visualising single-cell trajectories, including comparisons between two models 📈☆31Updated 3 years ago
- Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data☆48Updated 6 years ago
- Bayesian modelling of DNA methylation heterogeneity at single-cell resolution☆23Updated last year
- Fast algorithms for fitting topic models and non-negative matrix factorizations to count data.☆80Updated 2 weeks ago
- Brings SingleCellExperiment objects to the tidyverse☆36Updated this week
- Visualize Cytometry data with ggplot2☆59Updated last week
- flowWorkspace☆45Updated 4 months ago
- Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq☆48Updated 6 years ago
- R package for differential discovery analyses in high-dimensional cytometry data☆20Updated 5 months ago
- Clone of the Bioconductor repository for the basilisk package.☆28Updated last month
- R interface to morpheus.js heatmap widget☆38Updated 4 years ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆78Updated 2 months ago
- pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data☆56Updated 2 months ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 7 months ago
- R package for benchmarking single cell analysis methods☆31Updated last year
- Quantify and interpret divers of variation in multilevel gene expression experiments☆64Updated 3 weeks ago
- Download, integration and visualizations of the variety & volume of TCGA data.☆51Updated 2 years ago
- An R package for multivariate adaptive shrinkage.☆92Updated 8 months ago
- My notes/usage examples for various Bioconductor packages☆15Updated 8 years ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated 2 weeks ago
- R package of techniques for comparing clusterings of single-cell sequencing data☆38Updated last year
- A Grammar of Data Manipulation for Omics Data☆21Updated 4 years ago
- ☆16Updated last year
- Interactive Cytometry Data Analysis☆67Updated 2 weeks ago