Exploring dimension-reduced embeddings
☆111Jul 6, 2022Updated 4 years ago
Alternatives and similar repositories for sleepwalk
Users that are interested in sleepwalk are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Feb 16, 2024Updated 2 years ago
- A wrapper around the sleepwalk package that allows for interactive knn visualizations of an embedding.☆23May 8, 2024Updated 2 years ago
- Develop and host GitHub actions for Bioconductor☆11Apr 22, 2021Updated 5 years ago
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆41Sep 17, 2021Updated 4 years ago
- Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).☆24Jul 10, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Grammar of Data Manipulation for Omics Data☆21Aug 31, 2020Updated 5 years ago
- Geometry-preserving random sampling☆99Oct 29, 2024Updated last year
- Automate package and project setup for Bioconductor packages☆56Mar 31, 2026Updated 3 months ago
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Oct 5, 2017Updated 8 years ago
- Clone of the Bioconductor repository for the TileDBArray package.☆11Apr 10, 2026Updated 3 months ago
- Implementation of the matrixStats API for sparse matrices☆55Apr 2, 2025Updated last year
- Code for the paper on t-SNE with variable degree of freedom☆25Aug 5, 2020Updated 5 years ago
- A performant scientific image visualization system.☆36Updated this week
- Python package with CLI for the analysis of single cell methylation data. Now known as MethSCAn: https://github.com/anders-biostat/MethSC…☆12Mar 22, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆55Feb 19, 2025Updated last year
- ☆16Sep 8, 2024Updated last year
- COMET Single-Cell Marker Detection tool☆34Jun 21, 2022Updated 4 years ago
- Transcript quantification import with automatic metadata detection☆72Updated this week
- ☆97Apr 18, 2024Updated 2 years ago
- An R package implementing the UMAP dimensionality reduction method.☆367Jul 3, 2026Updated 3 weeks ago
- An algorithm for mapping cell state transitions.☆28Mar 3, 2023Updated 3 years ago
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆26Mar 15, 2023Updated 3 years ago
- Tidy up computational biology objects☆50Feb 1, 2019Updated 7 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Raster geoms for ggplot2☆237Jun 6, 2023Updated 3 years ago
- Explore design matrices interactively with R/Shiny☆38Apr 28, 2026Updated 2 months ago
- A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package☆15May 8, 2026Updated 2 months ago
- R package for analyzing single-cell RNA-seq data☆180Feb 29, 2024Updated 2 years ago
- A `DataFrame` (`S4Vectors`) backend for `dplyr`☆21Jun 5, 2026Updated last month
- Fast covariance, correlation, and cosine similarity.☆37Nov 23, 2021Updated 4 years ago
- Clone of the Bioconductor repository for the scater package.☆95Apr 29, 2026Updated 2 months ago
- Issues and pull requests for BiocStyle should go here.☆15Updated this week
- ☆19Jun 15, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Reconstruct the lineage topology of a scRNA-seq differentiation dataset.☆19Jun 25, 2020Updated 6 years ago
- Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data☆155Jun 26, 2026Updated 3 weeks ago
- Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot.☆451Dec 28, 2025Updated 6 months ago
- Comparison of single-cell normalization methods using multiple datasets with ground-truth labels☆19Dec 2, 2019Updated 6 years ago
- A software package for analyzing snapshots of developmental processes☆165Sep 15, 2022Updated 3 years ago
- R package for benchmarking single cell analysis methods☆33Oct 4, 2023Updated 2 years ago
- very fast scatterplots for R☆270May 4, 2025Updated last year