Alternatives and similar repositories for kidney_sc_immune

Users that are interested in kidney_sc_immune are comparing it to the libraries listed below

• KChen-lab / MEDALT
  Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile
  ☆21Updated 2 years ago
• juliendelile / MouseSpinalCordAtlas
  Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…
  ☆25Updated 5 years ago
• JiekaiLab / SOT
  Single-cell Orientation Tracing
  ☆21Updated 3 years ago
• kharchenkolab / cacoa
  Single-cell Case Control Analysis
  ☆52Updated this week
• molgenis / scRNA-seq
  ☆18Updated last year
• Morriseylab / scExtras
  ☆14Updated last year
• amcdavid / CellaRepertorium
  Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)
  ☆15Updated 5 months ago
• JinmiaoChenLab / FastIntegration
  FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis
  ☆23Updated last year
• jbryois / scRNA_disease
  Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1
  ☆18Updated 5 years ago
• NBISweden / single-cell_sib_scilifelab
  SIB/Scilifelab autumn school in single cell omics 2019.
  ☆22Updated 6 years ago
• Siliegia / SIGMA
  R package for SIGMA, a clusterability measure for scRNA-seq data
  ☆12Updated 4 years ago
• SGDDNB / GeneSwitches
  Ordering gene-expression and functional events in single-cell experiments
  ☆27Updated last year
• cole-trapnell-lab / monocle2-rge-paper
  Scripts needed to generate the figures for the Monocle 2 paper (Qiu et al, 2017)
  ☆29Updated 5 years ago
• prabhakarlab / RCAv2
  R package for robust clustering of single cell RNA sequencing data
  ☆36Updated last year
• morris-lab / CellTagR
  This repository contains the CellTag data analysis R package to support clone calling and lineage reconstruction.
  ☆21Updated 3 years ago
• mkarikom / RSoptSC
  Cell-cell communication and lineage inference for scRNA-seq data
  ☆24Updated 2 years ago
• powellgenomicslab / DropletQC
  Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data
  ☆40Updated 4 years ago
• atakanekiz / CIPR-Package
  Cluster Identity Predictor (R package implementation)
  ☆21Updated 3 years ago
• klarman-cell-observatory / HTAPP-Pipelines
  A record of the analysis pipelines used to create the HTAPP data
  ☆34Updated 8 months ago
• caleblareau / gchromVAR
  Cell type specific enrichments using finemapped variants and quantitative epigenetic data
  ☆47Updated 2 years ago
• single-cell-genetics / singlecell_neuroseq_paper
  Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation
  ☆22Updated last year
• ggjlab / scHCL
  ☆47Updated 5 years ago
• veltenlab / rnamagnet
  ☆25Updated 4 months ago
• rikenbit / scTensor
  R package for detection of cell-cell interaction using Non-negative Tensor Decomposition
  ☆34Updated 6 months ago
• yinqingl / nucseq_analysis
  single nuclei RNA-seq analysis toolbox
  ☆10Updated 9 years ago
• Neurosurgery-Brain-Tumor-Center-DiazLab / CONICS
  CONICS: COpy-Number analysis In single-Cell RNA-Sequencing
  ☆75Updated 2 years ago
• ZJUFanLab / CellTalkDB
  A manually curated database of literature-supported ligand-receptor interactions in human and mouse
  ☆30Updated last year
• PCAWG-11 / Heterogeneity
  Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes
  ☆44Updated 4 years ago
• shenorrLabTRDF / cellAlign
  ☆43Updated 4 years ago
• ati-lz / HCA_Benchmarking
  This repository contains HCA Benchmarking codes
  ☆26Updated 6 years ago