bjstewart1 / kidney_sc_immune
Repository for scRNAseq study of human kidneys
☆15Updated 5 years ago
Alternatives and similar repositories for kidney_sc_immune:
Users that are interested in kidney_sc_immune are comparing it to the libraries listed below
- ☆12Updated 7 months ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 3 years ago
- Cluster Identity Predictor (R package implementation)☆19Updated 2 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- ☆13Updated 7 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆21Updated 7 months ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆25Updated 3 months ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆19Updated last year
- ☆18Updated 11 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆22Updated 2 years ago
- Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression☆15Updated 7 months ago
- A record of the analysis pipelines used to create the HTAPP data☆31Updated 2 months ago
- Scripts needed to generate the figures for the Monocle 2 paper (Qiu et al, 2017)☆28Updated 4 years ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Updated 2 years ago
- ☆31Updated 9 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 3 months ago
- Lung cancer 10X analysis☆11Updated 4 years ago
- Ordering gene-expression and functional events in single-cell experiments☆21Updated 11 months ago
- This repository contains the CellTag data analysis R package to support clone calling and lineage reconstruction.☆20Updated 2 years ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆23Updated 4 years ago
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- ☆16Updated 5 years ago
- analysis script for GBM single cell RNA seq data☆17Updated 3 years ago
- Inferring CNV data from single cell ATAC seq☆23Updated last year
- R markdown notebooks for the Tabula Muris network analysis in Iacono et al. (2019)☆12Updated 3 years ago
- Marker gene selection from scRNA-seq data☆15Updated 4 years ago
- scripts for analyzing data of macrophage development in human☆10Updated 5 years ago
- Framework for Unified Single-Cell Analysis (FUSCA) is a software package for single-cell data analysis developed in R. At the moment, it …☆18Updated 2 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆31Updated last year