Alternatives and similar repositories for snp-selex

Users that are interested in snp-selex are comparing it to the libraries listed below

• liulab-dfci / TRUST4_manuscript_evaluation
  TRUST4 manuscript evaluation
  ☆15Updated 3 years ago
• dibbelab / singlecell_bcatlas
  Breast Cancer Single Cell Atlas
  ☆12Updated 3 years ago
• MarieOestreich / hCoCena
  ☆16Updated 6 months ago
• kundajelab / bpnet-manuscript
  BPNet manuscript code.
  ☆12Updated 4 years ago
• jaymahat / scGROseq
  scGRO-seq analyses codes
  ☆13Updated last year
• liulab-dfci / lisa
  epigenome analysis to rank transcription factors
  ☆13Updated 5 years ago
• chenhcs / GIANT
  GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.
  ☆12Updated 2 years ago
• rpmccordlab / SMILE
  SMILE: Mutual Information Learning for Integration of Single Cell Omics Data
  ☆11Updated 2 years ago
• JamesJoly / DGSEA
  An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…
  ☆14Updated 2 years ago
• vincenthahaut / FLASH-Seq
  ☆10Updated 3 years ago
• CostaLab / MOJITOO
  MOJITOO: a fast and universal method for integration of multimodal single cell data
  ☆11Updated 10 months ago
• hemberg-lab / VASAseq_2022
  This repository aims to serve as an index of the work described at Salmen & De Jonghe et. al 2022
  ☆23Updated 3 years ago
• veltenlab / mitoClone
  ☆12Updated 4 years ago
• klarman-cell-observatory / perturbseq
  Perturb-seq analysis package
  ☆14Updated last year
• tanaylab / embflow
  ☆12Updated 2 years ago
• ML4BM-Lab / ELATUS
  ☆12Updated 5 months ago
• Vivianstats / scINSIGHT
  Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data
  ☆22Updated last year
• Roy-lab / HiC-Reg
  HiC-Reg is a tool to predict Hi-C contact counts from one-dimensional regulatory signals
  ☆11Updated 5 years ago
• broadinstitute / mix_seq_ms
  Code associated with MIX-seq manuscript
  ☆15Updated 5 years ago
• FertigLab / pycogaps
  python API to the CoGAPS NMF package
  ☆19Updated 3 months ago
• celiamtnez / snRNA-seq2_young
  Analysis of snRNA-seq2 data coming from 3 months old mouse liver, dissecting the influence ploidy has on gene expression.
  ☆13Updated 3 years ago
• matsengrp / sumrep
  Summary statistics for repertoires
  ☆17Updated 2 years ago
• dbrg77 / ISSAAC-seq
  ☆17Updated 2 years ago
• mingjingsi / FIRM
  Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets
  ☆12Updated 2 years ago
• csglab / GEDI
  Gene Expression Decomposition and Integration
  ☆19Updated 6 months ago
• de-Boer-Lab / MAUDE
  Mean Alterations Using Discrete Expression
  ☆14Updated last year
• GreenleafLab / ChrAccR
  Analyzing chromatin accessibility data in R
  ☆18Updated 2 years ago
• alberlab / igm
  Integrated Genome Modeling (IGM): multi-modal data-driven simulator of genome structures
  ☆12Updated 2 years ago
• erhard-lab / price
  Improved Ribo-seq enables identification of cryptic translation events
  ☆15Updated 7 years ago
• wulabupenn / scNT-seq
  Data analysis pipeline for scNT-seq (single-cell metabolically labeled new RNA tagging sequencing)
  ☆16Updated 2 years ago