MarioniLab / EmbryoTimecourse2018Links
Data and analysis scripts for our Embryo Timecourse paper.
☆68Updated 5 years ago
Alternatives and similar repositories for EmbryoTimecourse2018
Users that are interested in EmbryoTimecourse2018 are comparing it to the libraries listed below
Sorting:
- Publication Page for Satpathy*, Granja* et al 2019☆94Updated 5 years ago
- R implementation of MULTI-seq sample classification workflow☆63Updated last year
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆78Updated 3 years ago
- scRNA-seq cell type identification☆43Updated 5 years ago
- Mouse cell atlas☆60Updated 5 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆96Updated 4 years ago
- A tool that allows to get UMI counts from a single cell protein assay☆82Updated 2 months ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated last year
- ☆69Updated last year
- Single cell RNA-seq analysis bundle☆35Updated 5 years ago
- ☆63Updated 4 years ago
- Processing pipeline scripts for sci-RNA-seq3 (bash, R, python)☆43Updated 4 years ago
- Single Cell Cluster Evaluation☆94Updated 3 years ago
- ☆68Updated last year
- Publication Page for MPAL Paper 2019☆82Updated 5 years ago
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆95Updated 2 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 2 months ago
- Single Cell Analysis of Five'Ends☆50Updated last year
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆76Updated 4 months ago
- scWGCNA☆61Updated 2 years ago
- Pipelines for the analysis of 10x single-cell RNA-sequencing data☆59Updated 2 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆39Updated 6 months ago
- Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR☆89Updated last year
- simpler single cell RNAseq data clustering☆40Updated 4 months ago
- Analysis of cell-cell communication at single-cell resolution☆101Updated 10 months ago
- Create cisTarget databases☆52Updated 3 weeks ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆107Updated 3 months ago
- ☆62Updated 5 years ago