Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R
☆19Aug 20, 2026Updated last month
Alternatives and similar repositories for HPCell
Users that are interested in HPCell are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Efficiently compute robust markers across single-cell datasets☆13Apr 21, 2021Updated 5 years ago
- Repel Visually Similar Colors for Colorblind Users (CRAN)☆11Aug 22, 2026Updated last month
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- Extension of SpatialExperiment with sf☆58May 6, 2026Updated 4 months ago
- Single-cell differential expression☆19Apr 23, 2026Updated 4 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Unbiased single-cell transcriptomic data cell type identification☆15Sep 15, 2026Updated last week
- Identifying cell subpopulational differences among single-cell biospecimens☆17Sep 27, 2024Updated last year
- R package to visualize gene expression data based on weighted kernel density estimation☆116Feb 6, 2026Updated 7 months ago
- ☆28May 16, 2025Updated last year
- AnnData interoperability in R☆197Updated this week
- R implementation of the Reshef and Rumker CNA method (https://github.com/immunogenomics/cna)☆15Aug 10, 2026Updated last month
- IKAP - Identifying K mAjor cell Population groups in single-cell RNA-seq analysis☆19Mar 16, 2020Updated 6 years ago
- Variance stabilizing transformation for Gamma Poisson distributed data☆22Apr 11, 2023Updated 3 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆60May 14, 2026Updated 4 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Gene Set Enrichment Analysis Made Awesome☆12May 11, 2018Updated 8 years ago
- ☆10Jun 19, 2026Updated 3 months ago
- From geospatial to spatial -omics☆104Jul 24, 2026Updated last month
- Draw heatmap simply using a tidy data frame☆364Feb 7, 2026Updated 7 months ago
- Brings SummarizedExperiment to the tidyverse☆31Sep 15, 2026Updated last week
- Framework for sensitive DE testing (using neighbourhoods)☆78Nov 11, 2025Updated 10 months ago
- Python library for plotting Cellphonedb results. Ported from ktplots R package.☆57Jun 29, 2026Updated 2 months ago
- Cell-type Relationship Analysis Workflow Done Across Distances☆42Nov 18, 2025Updated 10 months ago
- Instructions and analysis scripts for single cell Higher Order Testing (scHOT)☆10Oct 7, 2020Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆22Updated this week
- Coarse-graining of large single-cell RNA-seq data into metacells☆110Apr 16, 2026Updated 5 months ago
- AUCell: score single cells with gene regulatory networks☆204Mar 9, 2024Updated 2 years ago
- Automated ingestion and conversion of various single-cell data formats, within and across species