biodavidjm / artMS
Analytical R Tools for Mass Spectrometry
☆14Updated last year
Alternatives and similar repositories for artMS:
Users that are interested in artMS are comparing it to the libraries listed below
- Single cell proteomics data processing☆26Updated 3 weeks ago
- R package for analysing proteomics data☆49Updated 2 years ago
- DEqMS is a tool for quantitative proteomic analysis☆23Updated last week
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆61Updated last month
- Shiny app for making and annotating Volcano plots☆23Updated 8 months ago
- ☆17Updated 4 months ago
- Single cell interactive plotting tools☆23Updated 4 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆28Updated last year
- Toolbox package for organizing and working with TCGA data☆27Updated last week
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆34Updated 3 weeks ago
- Statistical power studies for multi-omics experiments.☆31Updated 3 months ago
- An S3 data object and framework for common quantitative proteomic analyses☆40Updated 3 months ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆24Updated 5 months ago
- ☆42Updated 5 months ago
- Full annotation using shape-constrained trees☆25Updated last year
- Cancer Dependency Map package☆29Updated 8 months ago
- An R/Bioconductor package to identify higher-order molecular phenotypes☆15Updated last year
- Single-cell exploratory data analysis for RNA-Seq☆40Updated 4 years ago
- Workflow for single-cell RNA-seq analysis using Seurat☆41Updated last year
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Updated 5 years ago
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆35Updated this week
- Please consider using/contributing to https://github.com/nf-core/scdownstream☆25Updated 10 months ago
- A toolkit for optimal workflow recommendation for proteomics data differential expression analysis☆12Updated 6 months ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆30Updated 3 years ago
- An R package for analyzing high-dimensional cytometry data using the tidyverse.☆18Updated 8 months ago
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆24Updated 8 months ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆23Updated 4 years ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆14Updated 3 years ago
- Automated cell filtering for single-cell RNA sequencing data☆24Updated last year
- 🏺 Exploring novel tumor epitope identification☆34Updated 4 years ago