biodavidjm / artMS
Analytical R Tools for Mass Spectrometry
☆14Updated last year
Alternatives and similar repositories for artMS:
Users that are interested in artMS are comparing it to the libraries listed below
- Single cell proteomics data processing☆26Updated 2 weeks ago
- R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.☆13Updated this week
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆59Updated 3 weeks ago
- Quantitative features for mass spectrometry data☆27Updated last week
- ☆13Updated last year
- User-submitted RNA-seq data analysis tools for BioJupies.☆20Updated 4 years ago
- Mass spectrometry imaging toolbox☆49Updated 3 months ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- DEqMS is a tool for quantitative proteomic analysis☆23Updated 3 months ago
- Proteomics Toolset for Integrative Data Analysis☆22Updated last year
- Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics☆11Updated last year
- An R/Bioconductor package to identify higher-order molecular phenotypes☆16Updated last year
- rMSI processing methods using C++☆10Updated 3 years ago
- An R package for visualising cell-cell interactions☆43Updated 7 months ago
- ImmuneDB - A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data☆21Updated 10 months ago
- R package for analysing proteomics data☆49Updated last year
- MetNormalizer is used to normalize large scale metabolomics data.☆21Updated 4 years ago
- ☆17Updated 3 months ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆26Updated 6 years ago
- A GUI tool for easy and smooth visualisation and analysis of Spatial Transcriptomics datasets☆13Updated 3 years ago
- Code for Celia and Nils' immune aging project.☆9Updated 5 years ago
- An S3 data object and framework for common quantitative proteomic analyses☆40Updated 2 months ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆22Updated 4 months ago
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Updated 5 years ago
- Predicted cell-cell interactions of the aging mouse brain☆20Updated 5 years ago
- RNA-velocity informed embeddings for visualizing cellular trajectories☆43Updated 2 years ago
- A tool for large scale omics datasets evaluation☆24Updated last year
- Chemical Similarity Enrichment analysis of metabolomics datasets☆27Updated 8 months ago
- Protocol of the analysis of iTRAQ/TMT proteomics data including quantification, statistical analysis and maybe clustering☆12Updated 5 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆35Updated last week