biodavidjm / artMSLinks
Analytical R Tools for Mass Spectrometry
☆14Updated 3 weeks ago
Alternatives and similar repositories for artMS
Users that are interested in artMS are comparing it to the libraries listed below
Sorting:
- R package for analysing proteomics data☆50Updated 2 years ago
- Single cell proteomics data processing☆29Updated last month
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆63Updated last month
- ☆35Updated 3 years ago
- Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model☆13Updated 2 years ago
- An S3 data object and framework for common quantitative proteomic analyses☆47Updated 5 months ago
- Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/☆21Updated 2 years ago
- ☆36Updated 9 months ago
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆37Updated 2 weeks ago
- A toolkit for optimal workflow recommendation for proteomics data differential expression analysis☆19Updated last year
- Please consider using/contributing to https://github.com/nf-core/scdownstream☆26Updated last year
- rMSI processing methods using C++☆11Updated 3 years ago
- DEqMS is a tool for quantitative proteomic analysis☆24Updated 7 months ago
- Shiny app for making and annotating Volcano plots☆25Updated last year
- ☆24Updated last year
- Pathway-Level Information Extractor (PLIER): a generative model for gene expression data☆55Updated last year
- Netbooks is a JupyterHub catalog of use cases in gene regulatory network inference using netZoo methods..☆44Updated last month
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆27Updated last year
- functions and algorithms for single cell RNA-seq analyses☆12Updated 4 years ago
- ☆36Updated last month
- Interactive software tool for the assignment of cell types in single-cell studies.☆34Updated 2 years ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆37Updated 3 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Updated 6 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆30Updated 5 years ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆30Updated last year
- ☆18Updated 3 weeks ago
- An R/Bioconductor package to identify higher-order molecular phenotypes☆19Updated last year
- ☆23Updated last year
- 🏺 Exploring novel tumor epitope identification☆37Updated 5 years ago
- Summary statistics for repertoires☆17Updated 2 years ago