R package for detection of cell-cell interaction using Non-negative Tensor Decomposition
☆35Jun 19, 2025Updated 9 months ago
Alternatives and similar repositories for scTensor
Users that are interested in scTensor are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Calculation of distance metrics for matrices☆26Mar 1, 2019Updated 7 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆49Apr 21, 2025Updated 11 months ago
- R package for Bioconductor submission☆40Dec 8, 2022Updated 3 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Jan 4, 2023Updated 3 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆30Aug 16, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Gene regulatory network reconstruction from pseudotemporal single-cell gene expression data☆11Jul 11, 2024Updated last year
- Out-of-Core Principal Component Analysis☆19Dec 25, 2017Updated 8 years ago
- Classification of Single cells by Transfer Learning☆10Oct 11, 2025Updated 6 months ago
- ☆15Feb 28, 2022Updated 4 years ago
- Cell-cell communication and lineage inference for scRNA-seq data☆25May 3, 2023Updated 2 years ago
- Analysis of Single Cell Expression, Normalization and Differential expression☆13Feb 29, 2020Updated 6 years ago
- ☆30Jul 15, 2021Updated 4 years ago
- scID☆14Oct 21, 2021Updated 4 years ago
- Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information☆23Sep 30, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated last week
- A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better charac…☆44Oct 10, 2025Updated 6 months ago
- ☆361Dec 9, 2021Updated 4 years ago
- ☆61Jun 17, 2021Updated 4 years ago
- Cluster Identity Predictor (R package implementation)☆21Mar 8, 2022Updated 4 years ago
- Einstein Summation for Arrays in R☆12Updated this week
- scRNA-seq cell type identification☆44Oct 3, 2019Updated 6 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆97Nov 24, 2020Updated 5 years ago
- Independent Component Analysis decipher functional modules for better cell clustering and annotation☆17Apr 4, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Color blindness friendly visualization of single-cell and bulk RNA-sequencing data☆215Dec 10, 2025Updated 4 months ago
- ☆18May 15, 2025Updated 10 months ago
- This is the repository which contains the code that was used to generate the results and figures of the “Single-cell RNA-sequencing revea…☆13Jun 21, 2024Updated last year
- ☆75Feb 4, 2024Updated 2 years ago
- A pipeline to identify gene family using mutiple tools and scripts.☆11Aug 22, 2021Updated 4 years ago
- Repository for scRNAseq study of human kidneys☆15Jun 14, 2019Updated 6 years ago
- An energy landscape-based approach for measuring developmental states and inferring cellular trajectories from single cell RNA-seq data☆18Feb 17, 2021Updated 5 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆39Nov 16, 2021Updated 4 years ago
- NicheNet: predict active ligand-target links between interacting cells☆636Nov 12, 2025Updated 4 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- ☆47Jul 24, 2025Updated 8 months ago
- SPATA Package for spatial gene expression analysis☆21May 6, 2022Updated 3 years ago
- An R package to download and merge labeled single-cell RNA-seq data from the PanglaoDB database into a Seurat object.☆27Jun 1, 2023Updated 2 years ago
- Mapping out the coarse-grained connectivity structures of complex manifolds.☆238May 23, 2020Updated 5 years ago
- A computational method for inferring cell-cell communication signaling networks using single-cell transcriptomics data.☆21Dec 29, 2025Updated 3 months ago
- Advanced steps of the OSCA book☆14Nov 19, 2025Updated 4 months ago
- Automated ingestion and conversion of various single-cell data formats, within and across species☆13Jan 26, 2026Updated 2 months ago