kroganlab / mist
mist R package files
☆9Updated 8 months ago
Alternatives and similar repositories for mist:
Users that are interested in mist are comparing it to the libraries listed below
- Load bioinformatics datasets into a local database☆11Updated 2 years ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆26Updated 6 years ago
- R package for functionally scoring phosphorylation sites☆19Updated 5 years ago
- python based queries for the proteomesoflife neo4j network database☆13Updated 4 years ago
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆26Updated last year
- R package for analysing proteomics data☆49Updated last year
- Integration ribosome profiling - mass spectrometry☆14Updated this week
- Comparison of Adaptive Immune Receptor Repertoires☆26Updated 3 weeks ago
- ☆12Updated 3 weeks ago
- Estimate PTM hotspots in protein sequence alignments☆14Updated 6 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆48Updated 5 years ago
- Absolute quantification package based on quantms.io☆13Updated last week
- DEqMS is a tool for quantitative proteomic analysis☆23Updated 2 months ago
- Examples of TMT data analyses using R. Links to notebooks and repositories. Also a few spectral counting analyses.☆21Updated 2 years ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆25Updated last month
- A guide to running MaxQuant in Linux☆32Updated 5 years ago
- PRedictor of IMmunogenic Epitopes☆17Updated 9 months ago
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆82Updated last year
- ☆26Updated 3 weeks ago
- Absolve antibody variable domain sequence analysis☆16Updated 6 years ago
- ☆20Updated 3 years ago
- DIABLO - an integrative multi-group, multi-dataset classification method☆22Updated 5 years ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆33Updated this week
- Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads☆17Updated last year
- Detects hotspot regions for somatic mutations in 3D protein structures☆2Updated 11 months ago
- HLA-II ligand predictor.☆40Updated last year
- This is the public repository for the EPIC tool.☆17Updated 2 years ago
- CRISPR Indel, base edit analysis☆10Updated 4 years ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆19Updated 3 weeks ago