☆16Dec 11, 2018Updated 7 years ago
Alternatives and similar repositories for cluster_benchmarking_code
Users that are interested in cluster_benchmarking_code are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Comparison of dimensionality reduction methods☆30Mar 24, 2020Updated 6 years ago
- a pipeline for single cell RNA-seq data analysis☆67Dec 11, 2023Updated 2 years ago
- This contains the dataset for comparing scRNA-seq analysis methods☆93Aug 26, 2020Updated 5 years ago
- Interface to 10x Genomics' 1.3 m single cell data set☆19Aug 2, 2018Updated 7 years ago
- Clustering through Imputation and Dimensionality Reduction☆64Sep 21, 2017Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An algorithm used to classify the cell types from single cell rna sequence data.☆10Jan 24, 2021Updated 5 years ago
- Repository for scRNAseq study of human kidneys☆15Jun 14, 2019Updated 6 years ago
- ☆33Mar 4, 2024Updated 2 years ago
- R package for benchmarking single cell analysis methods☆32Oct 4, 2023Updated 2 years ago
- scLVM is a modelling framework for single-cell RNA-seq data that can be used to dissect the observed heterogeneity into different sources…☆110Dec 16, 2022Updated 3 years ago
- Discrete Distributional Differential Expression☆23Jan 3, 2019Updated 7 years ago
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆22Sep 16, 2019Updated 6 years ago
- Generate cellular maps of differentiation manifolds with complex topologies.☆27Jun 26, 2018Updated 7 years ago
- ☆14Nov 3, 2017Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- BASiCS: Bayesian Analysis of Single-Cell Sequencing Data. This is an unstable experimental version. Please see http://bioconductor.org/pa…☆88Apr 14, 2026Updated last month
- R package - Analysis of Single Cell Expression, Normalisation and Differential expression (ascend)☆22Aug 28, 2019Updated 6 years ago
- Reproducing the experiments of the paper "Deep generative modeling for single-cell transcriptomics"☆57Dec 15, 2018Updated 7 years ago
- Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"☆19Oct 29, 2019Updated 6 years ago
- A common data format and inference environment for single-cell trajectories 📦☆19Mar 31, 2026Updated 2 months ago
- all-paths graph kernel for protein-protein interaction extraction☆12Apr 22, 2014Updated 12 years ago
- A study to compare methods for clustering of scRNA-seq data☆47Jul 19, 2024Updated last year
- Clustering cells from single cell RNA seq assays☆46Nov 19, 2018Updated 7 years ago
- Quantnet: SFE quantlets☆11Oct 27, 2025Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Table of software for the analysis of single-cell RNA-seq data.☆340Updated this week
- Index and query k-mer matrices in BGZF☆12Apr 30, 2018Updated 8 years ago
- Random collection of bioinformatics thingies☆19Mar 13, 2016Updated 10 years ago
- K-means clustering for large single-cell datasets☆13Feb 10, 2026Updated 4 months ago
- R package to identify genes with differential distributions in single-cell RNA-seq☆35Mar 24, 2022Updated 4 years ago
- Interactive benchmarking of ranking and assignment methods☆16May 14, 2026Updated 3 weeks ago
- Geared simulations: Easy computations over posterior simulations☆12Sep 28, 2015Updated 10 years ago
- post-clustering differential expression test☆37May 28, 2019Updated 7 years ago
- ☆29Feb 1, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A TensorFlow implementation on Deep Clustering Network(DCN), ICML 2017☆13Oct 21, 2022Updated 3 years ago
- UNCURL is a tool for single cell RNA-seq data analysis.☆15Jun 27, 2022Updated 3 years ago
- Tools for processing UMI RNA-tag data☆132Apr 30, 2026Updated last month
- SAME (Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble): Cluster ensemble for single-cell RNA-seq data☆16May 4, 2021Updated 5 years ago
- ☆12Jun 17, 2019Updated 6 years ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 3 years ago
- A tool for the unsupervised clustering of cells from single cell RNA-Seq experiments☆129Jun 28, 2021Updated 4 years ago