yanboANU / Kmer2SNPLinks
☆26Updated 4 years ago
Alternatives and similar repositories for Kmer2SNP
Users that are interested in Kmer2SNP are comparing it to the libraries listed below
Sorting:
- R package and wrapper functions for identifying serial structural variations from genome assemblies☆27Updated last year
- Detect and phase minor SNVs from long-read sequencing data☆14Updated 3 years ago
- ☆28Updated last year
- interactive Multi Objective K-mer Analysis☆23Updated 2 years ago
- GAPPadder is tool for closing gaps on draft genomes with short sequencing data☆27Updated 8 years ago
- Convert HAL to VG☆22Updated last year
- The MafFilter genome alignment processor☆19Updated 5 months ago
- Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs☆26Updated last year
- recompute GFA link overlaps☆25Updated 3 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- Scaffolding with Ultralong Reads☆15Updated 4 years ago
- Reduction of Althaps and Duplicate Contigs for Improved Hi-C Scaffolding☆20Updated 7 months ago
- General purpose utility related to GAF files☆29Updated last month
- Simultaneous multi-sample transcript assembler for RNA-seq data☆17Updated 10 months ago
- Improved Phased Assembler☆28Updated 3 years ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆35Updated 4 months ago
- Scaffolding with assembly likelihood optimization☆21Updated 4 years ago
- ☆20Updated last year
- Differential k-mer analysis☆37Updated last year
- Generating UTRs from SHort Reads☆12Updated 5 years ago
- Gap2Seq is a gap filling and insertion genotyping tool.☆22Updated last year
- Lift-over alignments from variant-aware references☆34Updated 2 years ago
- base-accurate DNA sequence alignments using edlib and mashmap2☆32Updated 4 years ago
- Long-read aligner to pangenome graphs☆27Updated last year
- Kmer based genotyper for short reads.☆23Updated 4 years ago
- Long read aligner for cyclic and acyclic pangenome graphs☆39Updated last year
- Economic Genome Assembly from Low Coverage Illumina and Nanopore Data☆19Updated 3 years ago
- ☆10Updated 5 years ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 6 months ago
- Consensus genome annotation using OMA☆27Updated 4 months ago