isovic / raptor
Graph-based mapping of long sequences, noisy or HiFi.
☆54Updated 4 years ago
Related projects ⓘ
Alternatives and complementary repositories for raptor
- MarginPolish: Graph based assembly polishing☆45Updated 3 years ago
- vcfdist: Accurately benchmarking phased variant calls☆78Updated this week
- Pan-Genomic Matching Statistics☆48Updated 7 months ago
- A C++ library and utilities for manipulating the Graphical Fragment Assembly format.☆51Updated 2 years ago
- ☆34Updated 4 years ago
- Classifier for metagenomic sequences using FM-index with run-block compressed BWT.☆51Updated this week
- TGS scaffolding☆45Updated 3 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 4 years ago
- ☆77Updated 4 years ago
- Estimating k-mer coverage histogram of genomics data☆76Updated 11 months ago
- ☆47Updated 4 years ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆45Updated 3 years ago
- A streaming method for mapping nanopore raw signals☆31Updated 3 years ago
- A tool for Racon polishing of miniasm assemblies☆73Updated 3 years ago
- Parallel Sequence to Graph Alignment☆35Updated last year
- ☆12Updated 5 years ago
- A reimplementation of the WaveFront Alignment algorithm at low memory☆49Updated 5 months ago
- Show pangenome graphs in an easy way☆53Updated 2 years ago
- finshingTool☆54Updated 7 years ago
- ☆46Updated 4 months ago
- An Illumina PE genome contig assembler, can handle large (17Gbp) complex (hexaploid) genomes.☆44Updated last year
- Banded Striped DNA Sequence Alignment☆45Updated last year
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆35Updated last week
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆97Updated 3 years ago
- reference-based long read assemblies of bacterial genomes☆47Updated 3 years ago
- Panacus is a tool for computing statistics for GFA-formatted pangenome graphs☆85Updated 3 weeks ago
- ☆79Updated 6 months ago