jiang-junyao / IReNA
R package IReNA
☆26Updated 3 months ago
Alternatives and similar repositories for IReNA:
Users that are interested in IReNA are comparing it to the libraries listed below
- ☆29Updated 3 weeks ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆39Updated 11 months ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆36Updated last month
- Functional Inference of Gene Regulation☆40Updated 7 months ago
- ☆29Updated 2 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 3 years ago
- ☆24Updated last year
- Network construction Algorithm☆20Updated 5 months ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆16Updated last year
- ☆31Updated 9 months ago
- ☆37Updated 3 years ago
- ☆45Updated 6 months ago
- scWGCNA☆56Updated 2 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆28Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆26Updated 2 months ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆40Updated 3 years ago
- ☆39Updated 3 years ago
- Inferring CNV data from single cell ATAC seq☆23Updated last year
- ☆17Updated 5 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 3 months ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- single-cell clustering based on alternative splicing landscapes☆18Updated 11 months ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆59Updated 4 months ago
- ☆15Updated 8 months ago
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-c…☆18Updated 7 months ago
- ☆35Updated 11 months ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆25Updated 4 months ago
- ☆20Updated last year
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆17Updated last year