jiang-junyao / IReNALinks
R package IReNA
☆28Updated last year
Alternatives and similar repositories for IReNA
Users that are interested in IReNA are comparing it to the libraries listed below
Sorting:
- Functional Inference of Gene Regulation☆49Updated last year
- ☆32Updated 9 months ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆23Updated last year
- ☆39Updated 4 months ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated 10 months ago
- Aligning gene expression trajectories of single-cell reference and query systems☆76Updated 3 months ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 11 months ago
- ☆29Updated 2 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- Single-Cell Inference of Class Switch Recombination☆19Updated 2 months ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆28Updated 3 years ago
- ☆39Updated 4 years ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 8 months ago
- Computational pipeline to process EasySci-RNA data.☆21Updated last year
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- ☆39Updated 2 months ago
- scWGCNA☆61Updated 3 years ago
- Calculate cluster similarity between clusters from different single cell datasets/batches/samples.☆24Updated 6 months ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆34Updated this week
- Code used to process the data of the HBCA project☆32Updated last year
- ☆32Updated 4 years ago
- Gene group activity utility functions for Scanpy☆95Updated 10 months ago
- ☆59Updated 4 months ago
- ☆51Updated last year
- R and MATLAB scripts for MAGICAL☆11Updated last year
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 2 years ago
- ☆50Updated 5 years ago
- All code associated with manuscript detailing scATAC and scRNA-seq following stimulus of PBMCs☆41Updated 2 years ago