Vaeda method for computational doublet annotation
☆20Feb 1, 2026Updated 5 months ago
Alternatives and similar repositories for vaeda
Users that are interested in vaeda are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Integrating temporal gene expression modalities for trajectory inference and disease prediction☆11Sep 20, 2022Updated 3 years ago
- a scalable python suite for tree inference and advanced pseudotime analysis from scRNAseq data.☆70Jul 9, 2026Updated 2 weeks ago
- A set of files to do genomics analysis on python☆19Jun 5, 2025Updated last year
- Automatically annotate cell types, consistently across samples.☆25Updated this week
- Comparison of Adaptive Immune Receptor Repertoires☆30Jan 29, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆16Mar 8, 2024Updated 2 years ago
- A python implementation of scran computeSumFactors: normalization by deconvolution for single-cell RNA-sequencing☆35Nov 4, 2023Updated 2 years ago
- Learning meaningful representations of genes☆21Jul 7, 2025Updated last year
- Single-cell differential expression☆19Apr 23, 2026Updated 3 months ago
- Guided construction of single cell reference☆16Jul 3, 2023Updated 3 years ago
- Analysis of cell-cell communication at single-cell resolution☆107Sep 10, 2024Updated last year
- Python implementation of Milo for differential abundance testing on KNN graph☆85Feb 17, 2025Updated last year
- Haplotype-aware Hidden Markov Models for detecting CNVs from bulk RNA-seq☆13Apr 2, 2024Updated 2 years ago
- Charting spatial ligand-target activity using Renoir (ligand-taRgEt iNteractions acrOss spatIal topogRaphy)☆21Jun 26, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆16May 12, 2026Updated 2 months ago
- Multi-resolution Variational Inference☆23Jul 13, 2026Updated last week
- Dynamical systems methods for RNA velocity analysis☆24May 19, 2021Updated 5 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆32Dec 3, 2024Updated last year
- physics-informed neural network based method for solving single-cell population dynamics☆17Jun 23, 2026Updated last month
- k-NN-based mapping of cells across representations to transfer labels, embeddings, and expression values.☆16Updated this week
- ☆155Mar 20, 2026Updated 4 months ago
- ☆12Jun 11, 2023Updated 3 years ago
- A modular tool for proportion analysis in single-cell sequencing data☆26Feb 26, 2026Updated 4 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Feb 22, 2025Updated last year
- A toolking for cell type hierarchies: marker selection & consistent classification☆22Nov 26, 2023Updated 2 years ago
- rapids-singlecell: GPU-accelerated framework for scRNA analysis☆388Updated this week
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆33Jan 30, 2026Updated 5 months ago
- ☆11Sep 17, 2020Updated 5 years ago
- Python implementation of Gene Trajectory☆30Sep 4, 2024Updated last year
- R package to infer multicellular programs from single-cell data using multi-omics factor analysis (MOFA)☆15Aug 17, 2023Updated 2 years ago
- R and MATLAB scripts for MAGICAL☆12Jun 26, 2024Updated 2 years ago
- Time-resolved single-cell transcriptomics (Zman-seq)☆12Apr 9, 2025Updated last year
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆50Jul 20, 2022Updated 4 years ago
- ☆29Mar 24, 2026Updated 4 months ago
- Multi-omic velocity inference☆120Oct 23, 2024Updated last year
- Code used for muti cellular factor analysis☆18Dec 13, 2023Updated 2 years ago
- ☆16Sep 1, 2023Updated 2 years ago
- TF analysis from epigenetic and Hi-C data☆19Apr 1, 2025Updated last year
- Pairwise Hierarchical Model☆20Mar 11, 2022Updated 4 years ago