kostkalab / vaedaLinks
Vaeda method for computational doublet annotation
☆18Updated last week
Alternatives and similar repositories for vaeda
Users that are interested in vaeda are comparing it to the libraries listed below
Sorting:
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆18Updated 2 years ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆39Updated 2 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated 2 years ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆35Updated 4 years ago
- ☆16Updated 2 years ago
- ☆25Updated 3 years ago
- ☆24Updated 4 months ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Updated last year
- ☆12Updated 4 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Updated 3 weeks ago
- ☆12Updated 6 years ago
- RNA velocity validation☆22Updated 3 years ago
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆24Updated 2 years ago
- ☆29Updated 2 years ago
- ☆20Updated 2 years ago
- R package for analysing meaningful differences in the numbers of cell populations from single-cell phenotypic data☆22Updated 4 months ago
- Analyzing chromatin accessibility data in R☆18Updated 2 years ago
- Algorithms for single-cell analysis☆29Updated 4 years ago
- Difference in Intercellular Communication from scRNA-seq data☆24Updated 3 months ago
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated this week
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆45Updated 5 months ago
- Marker gene selection from scRNA-seq data☆16Updated 5 years ago
- ☆36Updated 11 months ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆30Updated 5 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Updated 11 months ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆21Updated 2 years ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆53Updated 2 months ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 10 months ago
- Analytical tools and pipelines for bulk and single cell epigenomic and human genetic data☆27Updated 5 years ago
- Landscape Single Cell Entropy☆21Updated 5 years ago