kostkalab / vaeda
Vaeda method for computational doublet annotation
☆16Updated 8 months ago
Alternatives and similar repositories for vaeda:
Users that are interested in vaeda are comparing it to the libraries listed below
- RNA velocity validation☆23Updated 2 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆25Updated last year
- ☆22Updated 2 years ago
- ☆12Updated 3 years ago
- scover☆23Updated last year
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆21Updated 8 months ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆36Updated 4 months ago
- ☆20Updated last year
- Information-based dimensionality reduction☆29Updated 2 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆23Updated 3 years ago
- ☆29Updated last year
- Gene Expression Decomposition and Integration☆17Updated last week
- ☆45Updated 7 months ago
- ☆12Updated 5 years ago
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆19Updated last year
- Landscape Single Cell Entropy☆19Updated 4 years ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆32Updated 3 years ago
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆18Updated last year
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated 11 months ago
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated 8 months ago
- A gene expression signature scoring Python package.☆12Updated 3 months ago
- ☆16Updated 7 months ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 3 months ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆15Updated 3 years ago
- ☆16Updated 9 months ago
- ☆32Updated 10 months ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 4 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆26Updated 4 years ago
- ☆16Updated last year
- Analyzing chromatin accessibility data in R☆18Updated last year