Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq at locus- or subfamily-level
☆26Aug 25, 2026Updated 2 months ago
Alternatives and similar repositories for irescue
Users that are interested in irescue are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆35Dec 11, 2025Updated 10 months ago
- A developed pipeline for Transposable element analysis.☆11Sep 30, 2025Updated last year
- ☆35Jun 12, 2024Updated 2 years ago
- Single-cell Transposable Element Locus Level Analysis of scRNA Sequencing☆26Sep 14, 2026Updated last month
- Tool comparison for detecting differentially expressed individual transposable elements☆12Jan 7, 2022Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Integrating long read sequencing enhances short read-based locus-specific transposable element quantification☆12May 12, 2025Updated last year
- Estimate locus specific human LINE-1 expression.☆42Jan 19, 2026Updated 9 months ago
- ☆122Apr 24, 2024Updated 2 years ago
- R package for single-cell comparative regulatory analysis☆13Jun 26, 2021Updated 5 years ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆27Feb 22, 2025Updated last year
- Code for analyses in the STARsolo manuscript☆12May 25, 2021Updated 5 years ago
- ☆21Nov 15, 2020Updated 5 years ago
- Pathway-Level Single-Cell Functional Profiling of Individual Patient Samples☆11Aug 6, 2025Updated last year
- A pipeline to detect chimeric transcripts derived from genes and transposable elements.☆38Apr 17, 2026Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- The Isoforms from Single-Cell; Long-read Expression Suite☆42Jan 14, 2025Updated last year
- ☆11Mar 31, 2025Updated last year
- ☆11Jan 29, 2020Updated 6 years ago
- wrapper scripts for convenient STARsolo processing of 10X and other scRNA-seq☆96Oct 15, 2026Updated 2 weeks ago
- Transposable element expression at unique loci in single cells with CELLO-seq☆12Jun 17, 2024Updated 2 years ago
- PolyAtailor is a user-friendly R package for measuring poly(A) tail length from NGS-based short-read and PacBio-based long-read sequencin…☆10Jul 8, 2022Updated 4 years ago
- Software for Quantifying Interspersed Repeat Expression☆69Jun 20, 2022Updated 4 years ago
- Multivariate stochastic modeling for transcriptional dynamics with cell-specific latent time using SDEvelo☆23Jan 28, 2025Updated last year
- Snakemake pipeline to analyze transposable element 'omics data.☆34Oct 19, 2026Updated last week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.