☆27Sep 26, 2024Updated last year
Alternatives and similar repositories for SymSim
Users that are interested in SymSim are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Bulk and single-cell Multi-Omics ground truth Simulator in R☆12Feb 10, 2026Updated 3 months ago
- SUmmarizing Multiple Enrichment analysis Results☆10Nov 14, 2024Updated last year
- R package for haplotype phasing using single-cell RNA-seq data☆14Aug 22, 2017Updated 8 years ago
- ☆19Feb 11, 2022Updated 4 years ago
- SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations☆23Jan 23, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- R package for single-cell comparative regulatory analysis☆10Jun 26, 2021Updated 4 years ago
- SLICER algorithm for inferring cell trajectories. See details in Welch et al., Genome Biology 2016: http://genomebiology.biomedcentral.co…☆16Oct 17, 2017Updated 8 years ago
- ☆35Feb 21, 2024Updated 2 years ago
- ☆18May 5, 2020Updated 6 years ago
- An R package for detecting Gene-by-Environment (GxE) interaction effects on the transcriptome using Allele Specific Expression quantified…☆22Oct 27, 2021Updated 4 years ago
- ☆19Sep 29, 2021Updated 4 years ago
- Find CNVs in single cell sequencing data.☆20Apr 4, 2026Updated 2 months ago
- cisTopic: Probabilistic modelling of cis-regulatory topics from single cell epigenomics data☆147Apr 5, 2024Updated 2 years ago
- A tool for identifying Phenotype-Associated cell Subpopulations from single-cell sequencing data by integrating bulk data☆19Jan 16, 2026Updated 4 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Efficiently compute robust markers across single-cell datasets☆13Apr 21, 2021Updated 5 years ago
- Benchmarking pipeline for single-cell perturbation prediction tools☆34Jul 11, 2025Updated 10 months ago
- ☆18Sep 23, 2024Updated last year
- A permutation-free framework for scalable, robust, and reference-based cell-cell communication analysis in single cell transcriptomics st…☆23May 23, 2026Updated 2 weeks ago
- ☆47Jun 21, 2019Updated 6 years ago
- Navigation links (and brief descriptions) to my repositories.☆13Nov 25, 2025Updated 6 months ago
- ☆20May 30, 2022Updated 4 years ago
- fast hierarchical clustering for large-scale single-cell data☆11Jul 11, 2021Updated 4 years ago
- factor models for omics data☆43Jun 1, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆34Aug 24, 2021Updated 4 years ago
- Enabling differential allele-specific analysis☆11Dec 28, 2024Updated last year
- Data and analysis for the Splatter paper☆31Dec 4, 2017Updated 8 years ago
- Pytorch implementation of EpiFoundation☆27Feb 25, 2025Updated last year
- ☆10Oct 15, 2025Updated 7 months ago
- Interactive single cell RNA-seq analysis webserver!☆10Mar 15, 2023Updated 3 years ago
- SAFE (Single-cell Aggregated clustering From Ensemble): Cluster ensemble for single-cell RNA-seq data☆19Mar 27, 2021Updated 5 years ago
- Unreal Engine Plugin to Automatically Shuffle Products on Shelves☆12Apr 11, 2018Updated 8 years ago
- ☆10Sep 27, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Clone identification from single-cell data☆65Nov 10, 2022Updated 3 years ago
- ☆17Sep 13, 2024Updated last year
- Next-Gen Sequencing tools from the Horvath Lab☆45Jan 6, 2026Updated 5 months ago
- A statistical simulator for rational scRNA-seq experimental design☆13Dec 14, 2020Updated 5 years ago
- ☆10Feb 12, 2019Updated 7 years ago
- Imputation of single cell RNA-sequencing data with autoencoder☆16Jun 23, 2021Updated 4 years ago
- Clone of the Bioconductor repository for the scRNAseq package.☆30Oct 10, 2025Updated 7 months ago