ciemss / pyciemssLinks
Causal and probabilistic reasoning with continuous time dynamical systems
☆19Updated last week
Alternatives and similar repositories for pyciemss
Users that are interested in pyciemss are comparing it to the libraries listed below
Sorting:
- TARDIS: Topological Algorithms for Robust DIscovery of Singularities☆43Updated last year
- Toolbox for non-linear calibration modeling.☆25Updated 7 months ago
- A library for bayesian variable selection☆29Updated 5 months ago
- JAX translation of boltz☆18Updated last month
- StochPy is a versatile stochastic modeling package which is designed for stochastic simulation of molecular control networks☆41Updated 3 weeks ago
- BioSCRAPE (Bio-circuit Stochastic Single-cell Reaction Analysis and Parameter Estimation)☆29Updated 3 months ago
- Whole-cell modeling tutorials☆16Updated 5 years ago
- Software tool for metabolic modelling in Systems Biology☆10Updated 4 years ago
- Piece-wise Linear curves converted to point-clouds, analysed with Persistent Homology, represented as HyperGraphs.☆16Updated 3 months ago
- Use LSTM neural network for 1D distributional data prediction☆22Updated 2 years ago
- Python framework for multi-parameter optimization and evaluation of protein folding models☆17Updated 4 years ago
- generalized principal component analysis (GLM-PCA) implemented in python☆60Updated 4 years ago
- Implementation of Fibered Auto-Encoders☆9Updated 4 years ago
- pyGPCCA - python GPCCA: Generalized Perron Cluster Cluster Analysis package to coarse-grain reversible and non-reversible Markov state mo…☆21Updated 3 months ago
- Generic API for dispatch to Pyro backends.☆16Updated 3 years ago
- Proteins as words, genomes as documents.☆20Updated 4 years ago
- The project proposal template for OpenBioML community projects.☆18Updated 2 years ago
- A package for making MuE observation models in Edward2.☆13Updated 4 years ago
- Tools for building and manipulating graphs in Python☆41Updated 3 weeks ago
- ☆44Updated last month
- Repo for "Evolution on rugged adaptive landscapes"☆12Updated 3 years ago
- Parsing MHC nomenclature in the wild☆17Updated 3 months ago
- "Variational inference tools to leverage estimator sensitivity."☆16Updated 2 years ago
- Branching Gaussian process☆30Updated 2 years ago
- Example notebooks that illustrate how to generate knowledge-based features. Features can be used in a variety of ML models, including rec…☆11Updated 3 years ago
- A Python package for General Graphical Lasso computation☆35Updated 4 months ago
- Documentation, models and code relating to the 3rd edition of the textbook Stochastic Modelling for Systems Biology☆31Updated 5 months ago
- A standard library for biological research.☆26Updated 3 weeks ago
- Rule-based modeling framework☆63Updated last month
- ☆25Updated 2 years ago