KrishnaswamyLab / MAGAN
☆17Updated 6 months ago
Alternatives and similar repositories for MAGAN:
Users that are interested in MAGAN are comparing it to the libraries listed below
- This repository implements Graph Variational Causal Inference (graphVCI), a framework that integrates prior knowledge of relational infor…☆16Updated last month
- resVAE is a restricted latent variational autoencoder that we wrote to uncover hidden structures in gene expression data, especially usin…☆12Updated 2 years ago
- Archetypal Analysis network (AAnet)☆32Updated 2 months ago
- Python Implementation of SIMLR for single-cell visualization and analysis☆23Updated 2 years ago
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆49Updated 3 years ago
- Code for Nature Scientific Reports 2020 paper: "Unsupervised generative and graph neural methods for modelling cell differentiation" by I…☆18Updated 4 years ago
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆11Updated 4 years ago
- using graph convolutional neural network and spaital transcriptomics data to infer cell-cell interactions☆56Updated 3 years ago
- Gromov-Wasserstein based optimal transport for aligning single-cell multi-omics data☆70Updated last year
- An unsupervised scRNA-seq analysis workflow with graph attention networks☆24Updated last year
- ☆49Updated 5 years ago
- Drug Response Variational Autoencoder☆30Updated 6 years ago
- Imputing Single-cell RNA-seq data by combining Graph Convolution and Autoencoder Neural Networks☆19Updated 9 months ago
- SemI-SUpervised generative Autoencoder models for single cell data☆18Updated 4 years ago
- ☆16Updated 4 years ago
- ☆18Updated 3 years ago
- ☆29Updated 3 years ago
- Generative adversarial networks for single-cell RNA-seq imputation☆39Updated 4 years ago
- covolutional neural network based coexpression analysis☆76Updated 4 years ago
- ☆19Updated 3 years ago
- Software for processing and analyzing STARmap experiments.☆36Updated 5 years ago
- ☆54Updated last year
- ☆65Updated last year
- iDeep: integrated prediction of RNA-protein binding sites using deep learning☆39Updated 4 years ago
- Learning disentangled representations of single-cell data for high-quality generation☆16Updated last year
- ☆55Updated 5 years ago
- Python 2.7 package with examples for evaluating a network's ability to group a given node set in network proximity.☆32Updated 2 years ago
- ☆16Updated last year
- Network-based project to explore gene connectivity through biological scales☆23Updated 5 months ago
- ☆99Updated 2 years ago