Signature Analysis and Visualization for Single-Cell RNA-seq
☆183Jun 10, 2024Updated 2 years ago
Alternatives and similar repositories for VISION
Users that are interested in VISION are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package implementation of Milo for testing for differential abundance in KNN graphs☆441May 11, 2026Updated 2 months ago
- Assessing the purity of single cell population☆154Jun 3, 2022Updated 4 years ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆92Dec 4, 2025Updated 8 months ago
- R package for the joint analysis of multiple single-cell RNA-seq datasets☆230Jul 2, 2026Updated last month
- Cell type prioritization in single-cell data☆146Mar 26, 2026Updated 4 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- NicheNet: predict active ligand-target links between interacting cells☆670Jun 1, 2026Updated 2 months ago
- Automated, probabilistic assignment of cell types in scRNA-seq data☆214Jan 9, 2023Updated 3 years ago
- Quantifying metabolism activity at the single-cell resolution☆190Feb 18, 2026Updated 5 months ago
- AUCell: score single cells with gene regulatory networks☆201Mar 9, 2024Updated 2 years ago
- SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.☆494Apr 5, 2024Updated 2 years ago
- TRAjectory-based Differential Expression analysis for SEQuencing data☆309Jun 17, 2025Updated last year
- Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets☆126Apr 16, 2025Updated last year
- Multi-sample multi-group scRNA-seq analysis tools☆239Jul 6, 2026Updated last month
- Spatial-eXpression-R: Cell type identification (including cell type mixtures) and cell type-specific differential expression for spatial …☆474Jan 22, 2026Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Single cell RNA-seq analysis bundle