AllenInstitute / MTG_celltypesLinks
Human cortical cell types
☆25Updated 6 years ago
Alternatives and similar repositories for MTG_celltypes
Users that are interested in MTG_celltypes are comparing it to the libraries listed below
Sorting:
- VoxHunt: Resolving human brain organoid heterogeneity through single-cell genomic comparison to spatial brain maps☆47Updated last year
- ☆48Updated 7 years ago
- Scripts related to VISp and ALM scRNA-seq and FISH analysis for Tasic, et al., 2018.☆24Updated 7 years ago
- Single cell RNA-seq analysis for transcriptomic type characterization☆38Updated 3 months ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆56Updated 6 months ago
- ☆51Updated 2 weeks ago
- Single-cell Hierarchical Poisson Factorization☆74Updated 3 years ago
- Multi-omics studies are available here☆52Updated 3 years ago
- Analysis pipeline for the adolescent mouse nervous system project☆24Updated 7 years ago
- Code to reproduce analysis of Milo manuscript☆14Updated 3 years ago
- Cytograph version used for adult human-brain analysis☆91Updated 6 months ago
- characterizing spatial gene expression heterogeneity in spatially resolved single-cell transcriptomics data with nonuniform cellular dens…☆81Updated 3 years ago
- Selecting the optimal trajectory inference based on a given dataset and user input 🔮☆19Updated 5 years ago
- ☆30Updated 3 years ago
- Quasilinear data representations for single-cell omics data analysis☆43Updated 2 years ago
- A machine learning method for the discovery of the minimum marker gene combinations for cell type identification from single-cell RNA seq…☆66Updated 4 months ago
- ☆66Updated 2 years ago
- Individual level Differential Expression Analysis for Single cells☆26Updated 3 years ago
- Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information☆23Updated 3 years ago
- Hierarchical classification of cells☆28Updated last year
- Wishbone is an algorithm to align cells along developmental trajectories with branches☆19Updated 5 years ago
- R package for specialised analysis of single cell data☆40Updated 3 years ago
- Pathway-Level Information Extractor (PLIER): a generative model for gene expression data☆54Updated last year
- Code for reproducing "Exploring genetic interaction manifolds constructed from rich single-cell phenotypes"☆65Updated 5 years ago
- ☆31Updated 4 years ago
- Data and code for the paper "Developmental diversification of cortical inhibitory interneurons"☆24Updated 7 years ago
- Analysis notebooks for the Covid-19 meta analysis that accompanies the Nature Medicine publication "Single-cell meta-analysis of SARS-CoV…☆25Updated 5 years ago
- ☆48Updated 2 months ago
- Quantifying experimental perturbations at single cell resolution☆112Updated last year
- SpatialCorr: Identify gene sets with spatially varying correlation☆17Updated last year