A tool for identifying Phenotype-Associated cell Subpopulations from single-cell sequencing data by integrating bulk data
☆20Jan 16, 2026Updated 8 months ago
Alternatives and similar repositories for scPAS
Users that are interested in scPAS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SCIPAC (Single- Cell and bulk data-based Identifier for Phenotype Associated Cells) is a computational method that identifies cells in si…☆16Jun 30, 2024Updated 2 years ago
- DEGAS is an R package that can be used to prioritize cells in relation to disease.☆14Nov 6, 2024Updated last year
- SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations☆26Jul 30, 2026Updated last month
- Dissecting the effects of DNA copy number variations on transcriptional programs at single-cell resolution☆14Feb 13, 2026Updated 7 months ago
- Perturbational analysis by causality-aware generative model for single-cell RNA-sequencing data☆24Dec 16, 2025Updated 9 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease☆17Mar 23, 2024Updated 2 years ago
- Use hodge decomposition for trajectory analysis☆26May 11, 2026Updated 4 months ago
- Cell clustering and communication network inference for single-cell transcriptomics☆14Sep 18, 2024Updated 2 years ago
- R package for single-cell comparative regulatory analysis☆12Jun 26, 2021Updated 5 years ago
- Traditional Chinese Medicine Data Analysis and Visualization☆18Aug 31, 2026Updated 3 weeks ago
- A permutation-free framework for scalable, robust, and reference-based cell-cell communication analysis in single cell transcriptomics st…☆27May 23, 2026Updated 4 months ago
- An eXplainable Cell-specific machine learning method to predict clinical Phenotypes using single-cell multi-omics☆17Sep 23, 2025Updated last year
- 《Linux 不入门到入门》网页：https://super9du.github.io/linux-primer/☆10Aug 7, 2022Updated 4 years ago
- ☆49Oct 29, 2025Updated 10 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Single-Cell Inference of Class Switch Recombination☆25Jun 19, 2026Updated 3 months ago
- Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer☆82Dec 16, 2023Updated 2 years ago
- Group Technical Effects (GTE)☆16Oct 18, 2025Updated 11 months ago
- An R package for fast topic inference to identify tissue architecture in multiplexed images☆18Jun 5, 2026Updated 3 months ago
- I have developed a local computer software called OmicsTools for unlimited, zero-code bioinformatics data analysis and visualization. Omi…☆26Apr 5, 2026Updated 5 months ago
- HaploSweep is a method for detecting and categorizing soft and hard selective sweeps based on haplotype structure.☆11Sep 24, 2024Updated last year
- https://relab.xidian.edu.cn/AgeAnno/#/☆15Oct 22, 2022Updated 3 years ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆23May 13, 2026Updated 4 months ago
- ☆10Aug 21, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆28Jun 4, 2023Updated 3 years ago
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆18Mar 17, 2026Updated 6 months ago
- SPAtial Transcriptomics resource for subCellular and High-throughput platforms☆25Dec 10, 2024Updated last year
- Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of …☆21Aug 28, 2025Updated last year
- A human universal senescence index to evaluate celluar senescence☆44Sep 11, 2025Updated last year
- A package for reference mapping and nice visualization☆25Dec 16, 2025Updated 9 months ago
- Ultrafast method to compute single-sample gene set enrichment scores for gene expression or proteomics data☆24Aug 13, 2026Updated last month
- Guided construction of single cell reference☆16Jul 3, 2023Updated 3 years ago
- ☆13Jul 16, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆51Nov 29, 2025Updated 9 months ago
- ☆19May 25, 2026Updated 3 months ago
- ☆17Aug 20, 2026Updated last month
- A computational framework☆20Jul 23, 2026Updated 2 months ago
- Automatic annotation of single-cell RNA-seq data from the literature☆48Jul 20, 2025Updated last year
- CellNavi is a deep learning framework designed to predict genes driving cellular transitions.☆56Jul 10, 2026Updated 2 months ago
- Pan-cancer human brain metastases atlas at single-cell resolution☆24Apr 3, 2025Updated last year