UW-GAC / GENESISLinks
GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness
☆38Updated 4 months ago
Alternatives and similar repositories for GENESIS
Users that are interested in GENESIS are comparing it to the libraries listed below
Sorting:
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆31Updated 3 weeks ago
- Manhattan++☆28Updated last year
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 6 years ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- Canonical SGE cluster genotype imputation pipeline☆12Updated 9 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- ☆40Updated 7 years ago
- ☆33Updated 2 years ago
- software package for integrative genetic association analysis☆34Updated last year
- ☆20Updated 2 years ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆52Updated 6 years ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆34Updated 4 months ago
- Generalized linear Mixed Model Association Tests☆42Updated last year
- R package to perform Bayesian Genome-Wide Association Studies☆40Updated last year
- Repository for resources we'd like to share with the community.☆24Updated 3 years ago
- Software for estimating correlation of trait effect sizes across populations☆46Updated 3 weeks ago
- Colocalization analysis of genetic association signals☆53Updated 2 weeks ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- Main ricopili repo for public releases☆48Updated 2 months ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- Read PLINK BED/BIM/FAM files into R☆41Updated 3 years ago
- A Fine-Mapping pipeline☆20Updated 5 years ago
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆17Updated 9 months ago
- Sample code for ldsc analyses in UKBB☆30Updated 2 years ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆34Updated 7 years ago
- ☆42Updated 3 weeks ago
- Scripts used for generating Neale Lab UKB results☆20Updated 2 years ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆23Updated 7 months ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆32Updated 4 years ago