thewonlab / H-MAGMA
☆32Updated last year
Alternatives and similar repositories for H-MAGMA:
Users that are interested in H-MAGMA are comparing it to the libraries listed below
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆31Updated 4 years ago
- ☆21Updated last month
- ☆19Updated last year
- A collection of various utilities for GWAS summary statistics☆27Updated 11 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 7 years ago
- Code supporting analyses in paper on fine-mapping AD loci☆15Updated 3 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- Colocalization analysis of genetic association signals☆52Updated 5 months ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆23Updated 5 years ago
- Primo☆16Updated 3 years ago
- ☆35Updated 4 years ago
- Manhattan++☆28Updated last year
- Regional association plots☆25Updated last year
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆17Updated 8 months ago
- ☆22Updated 3 years ago
- Software for estimating correlation of trait effect sizes across populations☆46Updated 3 weeks ago
- ☆46Updated 6 months ago
- software package for integrative genetic association analysis☆34Updated last year
- FLAMES: Accurate gene prioritization in GWAS loci☆34Updated 2 months ago
- An R package for creating ggplot2 based miami plots.☆16Updated 2 months ago
- Mediated Expression Score Regression (MESC)☆26Updated 2 years ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆23Updated 5 months ago
- Upgrade to coloc☆13Updated 6 years ago
- ☆18Updated 7 years ago
- Make LocusZoom-like plots with your own LD matrix.☆40Updated 2 years ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆28Updated 11 months ago
- Quality control steps for GWAS☆21Updated last year
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆31Updated last year
- Code for creating cell-type-specific regulatory element annotation files☆18Updated 10 months ago