RayDebashree / metaUSATLinks
metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using univariate GWAS summary statistics.
☆20Updated 4 years ago
Alternatives and similar repositories for metaUSAT
Users that are interested in metaUSAT are comparing it to the libraries listed below
Sorting:
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆34Updated last year
- Software implementing the Latent Causal Variable Model☆63Updated 5 years ago
- ☆11Updated 2 years ago
- Code for implementing Mendelian randomization investigations☆18Updated 9 years ago
- GWAS for survival analysis in large cohorts☆21Updated last year
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆19Updated last year
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆24Updated 3 years ago
- Regional association plots☆26Updated last year
- PRS pipeline using PRS_CS☆14Updated 3 months ago
- Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper☆18Updated last year
- GPA: Genetic analysis incorporating Pleiotropy and Annotation☆15Updated 5 years ago
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Updated 4 years ago
- An R package for generating comparative regional association plots☆18Updated 8 months ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆46Updated 2 years ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆28Updated last week
- ☆35Updated 2 years ago
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆14Updated 2 years ago
- Genetics ToolboX R package☆32Updated 5 years ago
- Adding random effects model to the METAL software☆14Updated 2 years ago
- LASSO for GWAS with summary statistics☆75Updated 4 years ago
- DENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.☆26Updated last year
- GENI plots to visualise results from genome-wide association studies☆30Updated 10 months ago
- Code supporting analyses in paper on fine-mapping AD loci☆16Updated 4 years ago
- Reading, querying and writing GWAS summary data in VCF format☆85Updated 2 months ago
- Learn and validate subtypes from multiple traits☆20Updated 4 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- Sample code for ldsc analyses in UKBB☆31Updated 2 years ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆52Updated 5 months ago
- lhcMR☆26Updated last year
- ☆17Updated last year