☆21Aug 11, 2021Updated 4 years ago
Alternatives and similar repositories for ensembleCNV
Users that are interested in ensembleCNV are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Copy number vaiation detection from SNP arrays☆97May 19, 2024Updated 2 years ago
- heuristics to merge structural variant calls in VCF format.☆38Oct 6, 2016Updated 9 years ago
- Interactive table from gemini output☆10Mar 5, 2019Updated 7 years ago
- Code and custom scripts relevant to gnomAD-SV (Collins*, Brand*, et al., 2020)☆38Jun 19, 2020Updated 5 years ago
- ☆20Nov 30, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆12Apr 26, 2020Updated 6 years ago
- GERMLINE is an algorithm for inferring long shared segments of Identity by Descent (IBD) between pairs of individuals in a large populati…☆15Apr 5, 2019Updated 7 years ago
- Finding cryptic relationships to boost disease gene detection☆12May 31, 2023Updated 2 years ago
- Structural Variant Prediction Viewer☆35Jul 19, 2017Updated 8 years ago
- VisCap is an open flexible, software program targeted to clinical laboratories for inference and visualization of germline copy number va…☆22Dec 13, 2019Updated 6 years ago
- an open-source pipeline for Affymetrix Axiom genotyping workflow on livestock species☆14Jul 22, 2016Updated 9 years ago
- A tool to quantify sub-genomic RNA (sgRNA) expression in SARS-CoV-2 artic network amplicon nanopore sequencing data.☆17May 30, 2022Updated 3 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19May 9, 2026Updated 2 weeks ago
- A tool for timing complex copy number gains in cancer.☆20Dec 4, 2025Updated 5 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- IBD based kinship estimation☆16Mar 3, 2023Updated 3 years ago
- BigWig manpulation tools using libBigWig and htslib☆30Aug 8, 2024Updated last year
- Scripts and data for Duran & Thiergart et al. Cell, 2018☆24May 3, 2019Updated 7 years ago
- A CNN model to identify MEIs in WGS☆13Mar 4, 2025Updated last year
- Detection and genotyping of structural variants☆20Apr 2, 2026Updated last month
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 7 years ago
- Example R scripts to run burden and association analysis on array CNV data☆14Nov 9, 2016Updated 9 years ago
- Integrated Variant Caller☆17Mar 15, 2018Updated 8 years ago
- Docker Image for Michigan Imputation Server☆18Oct 12, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- create a gemini-compatible database from a VCF☆55Jan 5, 2021Updated 5 years ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆31Feb 10, 2026Updated 3 months ago
- What's The Function of these genes?☆22Mar 17, 2017Updated 9 years ago
- Joint calling of gVCF, following GATK4 Best Practices☆12Apr 3, 2019Updated 7 years ago
- Integrated copy number variation detection toolset☆26Feb 12, 2020Updated 6 years ago
- Fast, accurate and simple to use command line tool for variant detection in NGS data.☆13Sep 3, 2019Updated 6 years ago
- Annotate 2D point clouds using overlay polygons☆15Jun 19, 2025Updated 11 months ago
- ☆10Apr 17, 2023Updated 3 years ago
- Fine mapping of genes associated with Parkinson's Disease using a variety of methods☆11Mar 7, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A tool to detect postzygotic single-nucleotide mosaicism from unpaired, trio, or paired samples.☆13Feb 23, 2021Updated 5 years ago
- Supporting information of 'Single-cell RNA sequencing of a European and an African lymphoblastoid cell line'☆11Feb 27, 2020Updated 6 years ago
- A framework to annotate SVs with previous known SVs (vcf file) and or with genomic features (gff and or bed files)☆13Mar 12, 2018Updated 8 years ago
- Ultra-fast, high-performing structural variation (SV) detector☆24Apr 26, 2023Updated 3 years ago
- ☆14Oct 29, 2021Updated 4 years ago
- Fast, elegant SSH connection manager with a TUI dashboard and MCP server☆48May 7, 2026Updated 2 weeks ago
- The Modular Aligner and The Modular SV Caller☆47Jul 18, 2023Updated 2 years ago