statgen / METAL
Meta-analysis of genomewide association scans
☆50Updated 7 months ago
Alternatives and similar repositories for METAL:
Users that are interested in METAL are comparing it to the libraries listed below
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆47Updated 4 years ago
- ☆25Updated 3 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆48Updated 4 months ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆18Updated 2 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 6 years ago
- Hypothesis Prioritisation in multi-trait Colocalization☆51Updated 10 months ago
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆24Updated 4 months ago
- ☆34Updated 4 years ago
- R package for CAUSE☆54Updated last year
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 3 years ago
- Partners Biobank genomics data QC☆25Updated 4 years ago
- GWAS for survival analysis in large cohorts☆21Updated 6 months ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆31Updated 4 years ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆33Updated 2 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆30Updated last year
- ☆60Updated 7 months ago
- corrplot of LDSC genetic correlation results☆49Updated 2 years ago
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆14Updated 3 years ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆23Updated 3 years ago
- A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.☆63Updated 4 years ago
- Software for estimating correlation of trait effect sizes across populations☆43Updated 2 years ago
- Regional association plots☆26Updated 10 months ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆28Updated 8 months ago
- Pleiotropy-informed conditional and conjunctional false discovery rate☆26Updated last year
- ☆28Updated 5 months ago
- Data objects for various sets of instruments☆44Updated 4 years ago
- ☆55Updated last month
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆55Updated 4 months ago
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆87Updated last year
- An R package for Mendelian Randomization☆38Updated 10 months ago