GENetic Effect-Size distribution Inference from Summary-level data
☆15Sep 6, 2020Updated 5 years ago
Alternatives and similar repositories for GENESIS
Users that are interested in GENESIS are comparing it to the libraries listed below
Sorting:
- A rapido and lightweight method for PGS computation☆14Feb 19, 2025Updated last year
- Calculate AUC based on GWAS summary statistics only☆10Jun 29, 2018Updated 7 years ago
- ☆13May 2, 2018Updated 7 years ago
- Fast manhattenplots using ggplot2☆13Feb 19, 2024Updated 2 years ago
- R script for generating functionally informed genetic risk scores from TWAS☆11Jul 20, 2023Updated 2 years ago
- GWAS SNP Regulatory Analysis Tool☆17Mar 19, 2015Updated 10 years ago
- Software to infer latent pleiotropic components from GWAS summary data☆15Jan 30, 2025Updated last year
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Mar 22, 2019Updated 6 years ago
- genetic correlation between phenotypes in the UK biobank☆13Feb 22, 2024Updated 2 years ago
- Library and command line scripts for fitting heteroskedastic linear mixed models to genetic data. Can be used to perform GWAS for genetic…☆18Sep 13, 2018Updated 7 years ago
- Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis☆18Mar 18, 2025Updated 11 months ago
- An R package for generating comparative regional association plots☆18Sep 30, 2025Updated 5 months ago
- ☆103Jun 26, 2022Updated 3 years ago
- ☆17Aug 25, 2025Updated 6 months ago
- Code used for the GWAS-by-subtraction of non-cognitive skills and follow-up analyses☆20Jan 15, 2021Updated 5 years ago
- GWAS QC, PCA, haplotype phasing, genotype imputation☆20Aug 13, 2025Updated 6 months ago
- High-definition likelihood inference of genetic correlations (HDL)☆128Dec 15, 2025Updated 2 months ago
- PRS-on-SPARK☆18Feb 4, 2021Updated 5 years ago
- GWAS Summary Statistics for Brain Imaging Phenotypes☆20Sep 6, 2021Updated 4 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆28Jul 30, 2025Updated 7 months ago
- R package for performing Mendelian Randomization using mixture models☆25Jan 27, 2020Updated 6 years ago
- This is a pipeline for calculating weights for TWAS☆33Aug 3, 2022Updated 3 years ago
- Cross Atlas Remapping via Optimal Transport☆12Dec 14, 2023Updated 2 years ago
- Specification for the GWAS-VCF format (manuscript in preparation)☆26Aug 3, 2021Updated 4 years ago
- Overview of GDC Harmonization Workflows☆36May 16, 2023Updated 2 years ago
- R script that performs gene-set or gene property analysis using TWAS results.☆32Sep 11, 2024Updated last year
- Genotype-based Prediction (GenoPred)☆77Updated this week
- shifts hg19/38 genomic position for feasible input format.☆12Jun 8, 2023Updated 2 years ago
- R package designed to simplify structural variant analysis☆74Dec 22, 2021Updated 4 years ago
- Clonal reconstruction from HTS data☆10Oct 27, 2021Updated 4 years ago
- GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with popula…☆44Sep 25, 2025Updated 5 months ago
- Training material for the GWAS Catalog REST API workshop☆13May 22, 2023Updated 2 years ago
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 6 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42May 2, 2018Updated 7 years ago
- detectRuns: a R Package for Runs of Homozygosity and Runs of Heterozygosity☆12May 25, 2023Updated 2 years ago
- Fast and Efficient Tool to Simulate Summary Statistics from Genome-Wide Association Studies☆12May 21, 2024Updated last year
- Harnessing FABRIC for Scalable Human Genome Sequence Analysis☆12Feb 7, 2026Updated last month
- 🌓 Allele specific analyses across cell states and conditions☆10Nov 28, 2022Updated 3 years ago
- RaMWAS: Fast Methylome-Wide Association Study Pipeline for Enrichment Platforms☆10Sep 22, 2021Updated 4 years ago